Naasia aerilata: GCM126_24750
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Entry
GCM126_24750 CDS
T09129
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
naei
Naasia aerilata
Pathway
naei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM126_24750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naei03019
]
GCM126_24750
03009 Ribosome biogenesis [BR:
naei03009
]
GCM126_24750
Enzymes [BR:
naei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GCM126_24750
Messenger RNA biogenesis [BR:
naei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCM126_24750
Ribosome biogenesis [BR:
naei03009
]
Prokaryotic type
rRNA processing factors
GCM126_24750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
BDZ46566
UniProt:
A0ABN6XNU7
LinkDB
All DBs
Position
2277532..2279901
Genome browser
AA seq
789 aa
AA seq
DB search
MVEETNPTNESGSTDDSAPAIETTPLAETAETGNRRRRTFMPRRASTGLGTVPVVGPDEV
EAVMSGASAQAAAEQAAADAPAEQPAEDAPAAATEQPDATEAEAPSAEPPAAAPQPAPEP
ARPPGPTTAIFFQAPPVLAPLPALPDDEPEEQDEESSAPSSTSRRRNRRRSGSGGGDDRP
ADEVQEAAPRPRRRVIEEITEPQKVKGSTRLEAKKQRRRDGRDAGRRRAVVTEAEFLARR
ESVERVMVVRSAAGRIEIGVLEDGVLAEHYVAKSQNQSLIGNVYLGRVQNVLPSMEAAFV
DIGRGRNAVLYSGEVDWDAAAAEGEKNQPRRIELALKAGDKVLVQVTKDPVGHKGARLTS
QVSLPGRYLVYVPNGSMNGISRKLPDTERARLKKILKEVLPDGVGVIVRTAAEGATDEQL
AVDVNRLTAQWQHISSQVESVQAPALLHSEPDLLVKIIRDVFNEDFSRLVIAGEDAQGTI
EGYLTSVAPDLLDRVEKYTGRGDVFADFRVQEQIDKALDRKVWLPSGGSLVIDRTEAMTV
IDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLETNRDLVL
RRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLAESMSDAPARAVESKQEPRRGGRT
KPPAPQTSRPAAGSTHAITDDARHALALIAASTLHKDAVEEAHGHEPQAPAASAPVQLPA
QVPVLDEPILDLPVVAPPKTRQLPPEAESLLDSVLEALPEPKKPGQGRSRSRRVSTPALT
PGVTGLDKS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagagacgaaccccacgaacgagtcgggctccacggacgactcggcccccgcg
atcgagacgacgcccctcgccgagacggctgagaccgggaatcgacgccggcgcacgttc
atgccgcgtcgggcatccaccggactcggcactgtgccggtcgtcggtccggacgaggtc
gaggccgtgatgagcggcgcgtcggctcaggcagccgccgagcaggccgcagccgatgcg
cctgccgagcagccggcggaggacgcacccgctgctgcgacggagcagccggacgccacc
gaggccgaggctccctccgccgagccgccggccgccgcaccgcagccggcgcccgagccc
gcgcgcccgcccggacccaccaccgcgatcttcttccaggccccgccggtgctcgcgccg
ctgcctgcccttcccgacgatgagccggaggagcaggacgaggagtcgtccgccccgtcc
tcgaccagccggcgccgcaaccgccgccgctcgggcagcggaggcggcgacgaccgtccc
gccgacgaggtccaggaggcggctccgcgcccccgccgccgcgtcatcgaggagatcacc
gagccgcagaaggtcaagggctccacgcggctcgaggcgaagaagcagcgccgtcgcgac
ggccgggatgccggacgccgtcgcgcggtcgtcaccgaggccgagttcctcgcccgccga
gagagcgtcgagcgcgtcatggtggtgcgcagcgccgccggccgcatcgagatcggggtg
ctcgaggacggcgtcctcgccgagcactacgtcgcgaagtcccaaaaccagtcgctgatc
ggcaacgtctacctgggccgcgtgcagaacgtgctgcccagcatggaggcggcgttcgtc
gacatcggccgcggccgcaacgcggtcctctactcgggcgaggtcgactgggatgccgcc
gcggcggagggcgagaagaaccagccccgccgcatcgagctcgctctcaaggccggcgac
aaggtcctcgtccaggtcacgaaggacccggtcggccacaagggcgcccggctcaccagc
caggtgtcgctgcccggtcgctacctcgtctacgtgcccaacggctcgatgaacgggatc
tcgcgcaagctcccggacaccgagcgcgcacgcctcaagaagatcctcaaggaggtgctc
cccgacggcgtcggcgtgatcgtgcgcaccgcggccgagggcgcgaccgacgagcagctc
gccgtggacgtgaaccggcttaccgcccagtggcagcacatcagctcccaggtggagtcc
gtgcaggcccccgcgctgctgcacagcgagccggacctgctcgtcaagatcatccgcgac
gtcttcaacgaggacttctcccggctcgtcatcgcgggcgaggacgcgcaggggacgatc
gagggctacctcacgtccgtcgcgcccgacctgctggatcgcgtagagaagtacaccggc
cggggcgacgtgttcgccgacttccgggtgcaggagcagatcgacaaggcgctcgaccgc
aaggtctggctgccctccggcggctcgctcgtcatcgaccgcaccgaggccatgacggtc
atcgacgtcaacaccggcaagttcgtcggctccggcggcaacctcgaggagaccgtcacc
aagaacaacctggaggcggccgaggagatcgtccgccagctgcgcctgcgcgacatcggc
ggcatcatcgtcatcgacttcatcgacatggtcctcgagaccaaccgcgacctcgtgctg
cgccgtctcgtcgaatgcctcagccgcgatcgcacgaagcaccaggtcgccgaggtgacg
tcgctcgggctcgtccagatgacccggaagaagctgggcctcggcctggccgagtccatg
tcggatgcgccggcgcgtgccgtcgagtcgaagcaggagccccgccgcggcggccgcacg
aagcctccggcgccgcagacgagccgccccgccgcgggcagcacgcacgcgatcaccgac
gacgcccgccacgcgctcgcgctcatcgccgcgagcaccctgcacaaggacgcggtggag
gaggcgcacggacacgagccgcaggccccggccgcgtcggctccggtgcagctcccggcg
caggtgcccgtgctcgacgagccgatcctcgacctgccggtcgtcgccccgccgaagacg
cgtcagctcccgccggaggccgagtcgctgctcgactccgtcctcgaggctctgccggag
ccgaagaagcccggacagggccgctcccgcagccgtcgcgtctccacccccgccctcacg
ccgggtgtgacggggctcgacaagtcctag
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