Naasia aerilata: GCM126_26550
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Entry
GCM126_26550 CDS
T09129
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
naei
Naasia aerilata
Pathway
naei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM126_26550 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naei03019
]
GCM126_26550 (deaD)
03009 Ribosome biogenesis [BR:
naei03009
]
GCM126_26550 (deaD)
Enzymes [BR:
naei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GCM126_26550 (deaD)
Messenger RNA biogenesis [BR:
naei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCM126_26550 (deaD)
Ribosome biogenesis [BR:
naei03009
]
Prokaryotic type
rRNA helicases
GCM126_26550 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
adh_short
UvrA_inter
Cas3-like_C_2
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
BDZ46746
LinkDB
All DBs
Position
2436039..2437706
Genome browser
AA seq
555 aa
AA seq
DB search
MSSPDPTVTSDAEPTGAEQSFSELGLDDRVLKALKDVGYETPSAIQAATIPPLLSGRDVV
GLAQTGTGKTAAFALPILSRLDLTQQTPQALVLAPTRELALQVCEAFESYAAHLRGVRVL
PVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHLDKGTLDLSELKYLVLDEADEMLRMGFA
EDVETILADTPEDKQVALFSATMPAQIRRISAKYLRDPEEISVKAKTTTSANTTQRYLVV
SYPQKVDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGYTAAAISGDVAQAQRERT
VNQLKSGKLDILVATDVAARGLDVERISHVVNYDLPIDTESYVHRIGRTGRAGRSGDAIS
FVTPRERRMLTAIEKATRQPLTQMQLPSTEDVNATRLTRFDDQITAALEQTARIDRFREI
IGHYVTHHNVPEADVAAALAVVAQGDTPLLLSPEDDRPTRFERDDRERAPRPDRDRGDRD
GDGDRPERRKRPARGDFATYRIEVGRRQKVEPRQIVGALAGEGDSRARTSAASTSGRTSR
SSSCPRTCRRTSSTG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcccctgatcccaccgtgacttccgacgctgagcccaccggcgccgagcagtcc
ttctccgagctcgggctcgacgaccgcgtgctcaaggcgctcaaggacgtcggctacgag
accccgtccgcgatccaggcggccaccatcccgccgctcctgtccggccgcgacgtcgtg
ggcctcgcccagacggggacgggcaagacggcggccttcgcgctgccgatcctctcccgc
ctcgacctgacccagcagaccccgcaggcgctcgtcctggcgcctacccgcgagctcgcg
ctccaggtctgcgaggcgttcgagagctatgccgcccacctccgcggtgtccgggtcctc
ccagtctacggcgggcagggctacggcgtgcagctgtccgcgctgcgccgcggcgtgcac
atcgtcgtcggaaccccgggccgcatcatggaccacctcgacaaggggacgctcgacctc
tcggagctcaagtacctggtgctcgacgaggcggacgagatgctccggatgggcttcgcc
gaggacgtggagacgatcctcgccgacacgcccgaggacaagcaggtcgccctgttctcg
gccaccatgcccgcgcagatccggcggatctccgccaagtacctccgcgacccggaggag
atctcggtcaaggcgaagacgaccacctcggccaacacgacccagcggtacctcgtcgtc
tcctacccgcagaaggtggatgccctcacccgcatcctcgaggtggagaacttcgagggc
atgatcgtgttcgtccgcaccaagaacgagaccgagacgctcgccgagaagctcagggcc
cgcggctacaccgcggcggcgatcagcggcgacgtcgcccaggctcagcgcgagcgcacc
gtgaaccagctgaagtcggggaagctcgacatcctcgtcgccaccgacgtcgcggcccgt
ggcctcgacgtcgagcgcatcagccacgtcgtcaactacgacctgccgatcgacaccgag
tcctacgtgcaccgcatcggccgcaccgggcgcgccggccggtcgggcgacgcgatcagc
ttcgtcacgccgcgcgagcgccggatgctgaccgcgatcgagaaggcgacccggcagccg
ctcacccagatgcaactgccgagcaccgaggacgtcaacgccacccggctgacgcgcttc
gacgaccagatcacggcggccctcgagcagacggcgcgcatcgaccggttccgcgagatc
atcgggcactacgtgacccaccacaacgtgccggaggcggatgtggcggccgcgctcgcg
gtcgtcgcccagggggacacgccgctcctcctctcgccggaggacgaccgccctacccgc
ttcgagcgcgacgaccgcgagcgcgccccgcggcccgaccgggatcgaggagaccgggat
ggcgacggcgatcgtcccgagcggcgcaagcgccccgcccgcggggatttcgcgacctac
cgcatcgaggtcggccggcggcagaaggtggagccgcggcagatcgtgggtgccctcgcc
ggcgagggggactcacgcgcgaggacttcggcggcatcgacatccggccggacttctcgc
tcgtcgagctgcccgcgaacctgtcggaggacgtcttcgaccggctga
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