Nanobdella aerobiophila: MJ1_0503
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Entry
MJ1_0503 CDS
T08382
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
naer
Nanobdella aerobiophila
Brite
KEGG Orthology (KO) [BR:
naer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naer03016
]
MJ1_0503
Enzymes [BR:
naer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MJ1_0503
Transfer RNA biogenesis [BR:
naer03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MJ1_0503
Prokaryotic type
tRNA splicing ligases
MJ1_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BBL45656
UniProt:
A0A915WS85
LinkDB
All DBs
Position
431890..433317
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AA seq
475 aa
AA seq
DB search
MDLKINKIDNNIFEIKEDKNMNVPVRIYANENLIEKMKNDKTLIQGKNVASLPGIYKYSI
VMPDGHEGYGFPVGGVAAFDINEGIISPGGIGYDINCGVRLIKTNLTYNEIKAKLKELVE
EIFKNVPAGVGETGKIILSTGQFKDSIEEGLDWSYREGYAWKEDLDYIESNGKLKEASID
YISDLAIRRGLDQLGTLGSGNHFLEIQVIEKIFNQEIAKILGLENDQVMIMIHTGSRGFG
HQIASDYIELGLNKYKDTIDRLPDRELIYLPFQSEEGQKYLKSMSAAANFAWNNRQLITY
QIRRSFEKVYNHSAEDIGLNILYDVAHNIAKIEKYDNKKLIVHRKGATRAFPAGSEELVS
KYNKIGQPVLIPGSMGTGSYILVANQNSVDLSFASSAHGAGRNLSRSSARKKFRYDDIIN
NLNKKGIIVKSTTKEGIIEEVPEAYKDIDEVVKVIDSLNISNIVARLRPIAVIKG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaaataaataaaattgacaataatatatttgaaattaaggaagataagaat
atgaatgtacctgttagaatttatgctaatgagaatctaatagaaaagatgaagaatgat
aaaaccctaatacaaggaaagaatgtggcaagcctacctggaatttataaatattctata
gttatgccagatggccatgaaggatatggatttccggtaggtggtgtagcggcttttgat
ataaacgaaggaataatctctccaggtggaataggatatgatataaattgcggagttaga
ttaataaaaacgaatttaacttataatgaaataaaggcaaaattaaaagaactagtagag
gaaatttttaagaatgtaccagcaggtgttggggaaacagggaaaataatactatccaca
ggtcaatttaaggattctatcgaggaaggattagactggagctatagagaaggatacgca
tggaaagaagatctagattatatagaatctaatggaaaattaaaagaggcatcaatagat
tatatatctgatttggctataagaagaggtttagatcaattaggaactctaggatctgga
aatcattttctagaaatacaagttattgaaaaaatatttaatcaagagatagcgaagata
cttggtttagaaaatgatcaggttatgataatgatccatacaggttccaggggttttggc
catcaaatagcttcagattatatagaattggggttaaataaatataaagatacaatagat
agattaccagatagagaactaatctatttaccatttcaatctgaggaagggcaaaaatac
ttaaaatctatgagtgctgcagcaaattttgcttggaataatagacaattaattacttac
caaattagaagatcatttgaaaaagtatataaccattctgcggaagatataggattaaat
atattatatgacgtagcgcataatatagcaaaaatagaaaaatatgataataaaaaatta
atagttcacagaaaaggtgctacaagagcatttccagcaggtagtgaagaactagttagt
aaatataacaagatagggcaaccagttttaataccaggttctatgggaaccggttcatat
atattggtcgcgaatcaaaactccgtagatctgtcttttgcttcatctgctcatggtgct
ggtagaaatttatcaagatcttcagcaagaaaaaaatttagatatgatgatataataaat
aatttaaataaaaagggaataattgtaaaatctacaactaaagaagggataattgaagaa
gttccggaagcttataaagatatagatgaagtagtaaaagttatagattcattgaatata
tcaaatatagtagctagacttagaccaattgcagtaataaaaggatag
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