Nanobdella aerobiophila: MJ1_0696
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Entry
MJ1_0696 CDS
T08382
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
naer
Nanobdella aerobiophila
Pathway
naer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJ1_0696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naer03019
]
MJ1_0696
Messenger RNA biogenesis [BR:
naer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MJ1_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
IFT20
DUF2025
ARM_LIN_C
Motif
Other DBs
NCBI-ProteinID:
BBL45838
UniProt:
A0A915SD09
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All DBs
Position
592929..594257
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AA seq
442 aa
AA seq
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MEIEVIPVGGYSYIGKNMTAIRIDDEIIIIDMGINVDNISKFGERESIVNKPMKELYDLD
IIPNDKILENYKGEIKGIILTHGHLDHIGAVNFLAPKYNVPIYCTPYTAELLKMQEKEYG
VILSNDIKKISPNSTINISDKLKINIINSTHSIPQSIMVDIITNKGHIVHTGDFKFDNFP
LIGKRTNYEKLKEIGRENVLLLISESTRSEELSKAQSEIIEKYMLYDVLKSLDTKGIIIT
TFASHISRLKSIIELGKEFNRKVIFIGRSMGKYIKAAEETNLYNFSEESEVYSDVKEYKK
ILENINNDKEQYLLVVTGHQGEPGSVLDKLSKDSFKFDIKDSTIIFANNVIPHPINEANR
KILEERLKRKGVNIIKDIHVSGHAKAQDHNMLIKMLNPENIVPNHGDINKKAAYYTIAEE
KGYKLGEDIFFIEDQQSKIFNI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaagtaatacctgtagggggttattcgtacataggtaaaaatatgactgca
atacgaattgatgatgaaataattattatagacatgggtataaatgtagataatatatca
aaatttggagaaagagaaagtattgtaaataaacctatgaaagaactatatgatctagac
ataataccaaatgacaagatattagaaaattataaaggagaaataaagggaataatatta
actcatggacatttagaccacataggtgctgtaaattttttagctccaaaatataatgtt
cctatatactgtactccttatactgcagaattattaaagatgcaagagaaagaatatgga
gttatattatcaaatgatattaaaaaaataagcccaaatagcacaataaatatatcagat
aaattaaagataaatataataaattctacacattctatacctcaatctataatggtagat
ataattacaaataaaggtcacatagttcatacaggtgattttaagtttgataattttcca
ttaataggtaaaagaacaaattatgaaaagctaaaagaaataggaagagaaaatgtatta
ttattaatatcagaatctacaagatcagaagaattatcgaaagctcaatcagaaataata
gaaaagtatatgttatatgatgtactaaaatctttagatacaaaaggtataattataaca
acatttgcttcacatatttctagattaaaatctataatagaattaggaaaagaatttaat
agaaaagtaatatttataggaagaagtatgggaaaatatataaaagctgctgaagaaaca
aatctttataatttttctgaagaatcagaagtgtatagtgacgtaaaagaatacaaaaag
atattagaaaacataaataatgataaagaacaatatttattagtagttacgggtcatcaa
ggtgaaccaggttcagtattagataaattatctaaagatagctttaaattcgatataaaa
gattctactataatatttgcaaataatgtaattccacatcctataaatgaagcaaacaga
aaaatattagaagaaagattaaagaggaagggagtaaatattataaaggatatacatgtt
tcaggacatgctaaagcccaagatcataatatgctaataaaaatgcttaatccagaaaat
atagttcccaatcatggggacataaataaaaaagccgcttactataccatagctgaagaa
aagggatacaaattgggagaagatatcttttttatagaagatcaacagagtaaaatattt
aatatataa
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