Nanobdella aerobiophila: MJ1_0718
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Entry
MJ1_0718 CDS
T08382
Name
(GenBank) exosome complex component Rrp41
KO
K11600
exosome complex component RRP41
Organism
naer
Nanobdella aerobiophila
Pathway
naer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MJ1_0718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naer03019
]
MJ1_0718
Messenger RNA biogenesis [BR:
naer03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MJ1_0718
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MJ1_0718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BBL45860
UniProt:
A0A915SYJ1
LinkDB
All DBs
Position
612500..613249
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AA seq
249 aa
AA seq
DB search
MSRFDGRKEDELRNIYIELNPIENAKGSAIFAFGETRVLAAVYGPRGSKMSKDYDRAFLR
VKYNMITFSVPERKKPTPGRREIEVSEVIKRAIEPALLLEELPGSIIDVYIEVLNANAGT
RTASINAVSLALSLAGIPMRDLVSSVAVGKVGQKILVDLNKDEEDYNSEKLKDIEEKRKF
IEFYGEGRATDIPIAYLPYKNEISLIQLDGEINNNELKDAINLGIKSCKNIKNLMKDKIL
EYFSDTNIR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtttgacggaagaaaagaagatgaattaagaaatatatatatagaattaaat
ccgatagaaaatgcaaaaggttctgcaatatttgcttttggagaaacaagagtattggct
gccgtgtatggtcctagagggtctaaaatgtcaaaagattatgatagagcatttttaaga
gtaaaatataatatgattacattttctgtacctgaaagaaaaaaaccaactccaggtaga
agagaaatagaagtatctgaagttattaaaagagcaatagaacctgcattattattagaa
gaattaccaggaagcataatagatgtatatatagaagtattaaatgcaaatgctggtact
agaactgcgagtattaatgcagtatcattagctttatctttagcaggtataccaatgaga
gatttggttagttcagttgctgtaggaaaggttggacaaaaaatattagttgatctaaat
aaagatgaagaagactataattcggaaaaattaaaggatatagaagaaaaaaggaaattt
atagaattttatggagaaggaagagctacagatataccaatagcatatttaccatacaaa
aatgaaatttcgttaatccaattagatggtgaaataaataataatgaattaaaagatgca
ataaatctaggaattaagtcttgcaaaaatataaaaaacctcatgaaagacaagatatta
gaatacttttccgataccaacataaggtaa
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