KEGG   Nanobdella aerobiophila: MJ1_0718
Entry
MJ1_0718          CDS       T08382                                 
Name
(GenBank) exosome complex component Rrp41
  KO
K11600  exosome complex component RRP41
Organism
naer  Nanobdella aerobiophila
Pathway
naer03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:naer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MJ1_0718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:naer03019]
    MJ1_0718
Messenger RNA biogenesis [BR:naer03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MJ1_0718
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MJ1_0718
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: BBL45860
UniProt: A0A915SYJ1
LinkDB
Position
612500..613249
AA seq 249 aa
MSRFDGRKEDELRNIYIELNPIENAKGSAIFAFGETRVLAAVYGPRGSKMSKDYDRAFLR
VKYNMITFSVPERKKPTPGRREIEVSEVIKRAIEPALLLEELPGSIIDVYIEVLNANAGT
RTASINAVSLALSLAGIPMRDLVSSVAVGKVGQKILVDLNKDEEDYNSEKLKDIEEKRKF
IEFYGEGRATDIPIAYLPYKNEISLIQLDGEINNNELKDAINLGIKSCKNIKNLMKDKIL
EYFSDTNIR
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtcaaggtttgacggaagaaaagaagatgaattaagaaatatatatatagaattaaat
ccgatagaaaatgcaaaaggttctgcaatatttgcttttggagaaacaagagtattggct
gccgtgtatggtcctagagggtctaaaatgtcaaaagattatgatagagcatttttaaga
gtaaaatataatatgattacattttctgtacctgaaagaaaaaaaccaactccaggtaga
agagaaatagaagtatctgaagttattaaaagagcaatagaacctgcattattattagaa
gaattaccaggaagcataatagatgtatatatagaagtattaaatgcaaatgctggtact
agaactgcgagtattaatgcagtatcattagctttatctttagcaggtataccaatgaga
gatttggttagttcagttgctgtaggaaaggttggacaaaaaatattagttgatctaaat
aaagatgaagaagactataattcggaaaaattaaaggatatagaagaaaaaaggaaattt
atagaattttatggagaaggaagagctacagatataccaatagcatatttaccatacaaa
aatgaaatttcgttaatccaattagatggtgaaataaataataatgaattaaaagatgca
ataaatctaggaattaagtcttgcaaaaatataaaaaacctcatgaaagacaagatatta
gaatacttttccgataccaacataaggtaa

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