Candidatus Nucleicultrix amoebiphila: GQ61_00550
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Entry
GQ61_00550 CDS
T04833
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
naf
Candidatus Nucleicultrix amoebiphila
Pathway
naf03030
DNA replication
naf03410
Base excision repair
naf03420
Nucleotide excision repair
naf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQ61_00550
03410 Base excision repair
GQ61_00550
03420 Nucleotide excision repair
GQ61_00550
03440 Homologous recombination
GQ61_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naf03032
]
GQ61_00550
03400 DNA repair and recombination proteins [BR:
naf03400
]
GQ61_00550
Enzymes [BR:
naf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQ61_00550
DNA replication proteins [BR:
naf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GQ61_00550
DNA repair and recombination proteins [BR:
naf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GQ61_00550
NER (nucleotide excision repair)
GGR (global genome repair) factors
GQ61_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ARN84084
UniProt:
A0A1W6N2J0
LinkDB
All DBs
Position
107785..110550
Genome browser
AA seq
921 aa
AA seq
DB search
MTETQNRQKHLYLIDGSGFIFRAYHALPPLTRMDGTPVNAVYGFTSMLLKILDKTDVDYF
CVVFDSARRNFRHDIYSQYKANRPEPPEDLIPQFPLIREVCNAFNVAMIEQEGYEADDLI
AAYVDEAQRNDTQVTIVSSDKDLMQLVRGGVEMLDPMKDRIIGRQQVIEKFGVPPEKVIE
VQALAGDSVDNIPGIPGIGLKTAAELINAYGTVEELLARSSEIKQPKRRQSLIDHAEDAR
ISKRLVVLDNTAPLVKHFNELNRQEIDPDKALHFLKEQGFKTLISRLERQWQGTENQLPN
NVNDQLKKEYELIVTPDHLKKWIKAIYNVGKVAVDTETTGLDPMQADLVGISLGLPDGKA
CYIPIAHKKAQQQLTLGDFASSESEALKQIPLSQIVDLLSPLMADPSILKVGHNIKYDLL
VLARYGFNLDTIDDTMVMSYVLDGTKNGHGMDELAKLHLNYKTITFEEVAGTGKNQITFD
YVDLKRALEYAAEDADITFRLHTLFKKRLVTESATSVYENIDRPLIPVLKDMEQTGVKID
VNYLDQLGKEFQKRLLELEKEIHGLAGEDFNIGSPKQLGEVLYDKLKLPGAKKSKLGAYV
TDADTLETLAGQGIVLAERVLDWRQLAKLKSTYTDALVRQINPKTLRLHTSYAMTITSTG
RLSSSNPNLQNIPIRTEEGRKIRRAFIPEVGFSLMSLDYSQIELRLLACMADIESLKEAF
RKGYDIHALTASEVFNVPFESVSPELRRQAKAINFGIIYGMSAFGLSQQLKISREEAGQY
IKAYHLKYPGITQYMEATKENARRQGFVETMFGRKCYINSILDKNPARKNFAERQAINAP
LQGSAADIIKIAMCHIKPVLTKENLKARMLLQVHDELIFEVPETQVELTAKIVKETMETA
VRIDVPMIADIGIGHNWADAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacacaaaaccgtcaaaagcatttatatctgattgatggatcaggctttatc
tttagagcttaccatgccctgccaccgttaacgcgcatggatggtactccagtgaatgcg
gtgtatggttttacgtccatgcttttaaaaatcctcgataaaacagatgtggattatttt
tgtgttgttttcgattcagcacgtcgaaattttaggcatgatatttactctcaatataaa
gctaatcgtccagagcctccagaagaccttatcccccaatttcctttgataagagaagtt
tgtaacgcttttaatgtggcaatgattgaacaggaaggttatgaggctgatgatcttatt
gctgcatatgtagatgaagcacagagaaatgatacacaggtaacgatcgtttcttcagat
aaagaccttatgcagttagttcgtggtggggttgagatgcttgatcccatgaaagaccgc
attattggtaggcagcaagtgattgagaaatttggagtccctcctgagaaagtgattgaa
gtccaagcacttgcgggtgatagcgttgataatattccaggcattcctgggattggtttg
aaaacggcagcggaactaattaatgcttatggaactgtggaagaattattagcgcgttct
tccgaaattaaacaacctaaaaggcgacagtcactgattgatcatgctgaagatgctcgt
atttcgaaaagacttgtcgttttggataatactgctcctttagtgaagcattttaatgaa
ctgaaccgccaagagatagatcctgataaagccttacattttttaaaagaacaaggattt
aagacgcttatttctcgattggaacgtcagtggcaaggaacggaaaatcagctgcctaat
aatgttaatgaccagcttaaaaaagaatatgagctgattgtaactcctgatcacctgaaa
aagtggatcaaggctatttacaatgttggtaaagttgcagtggatactgaaacaacagga
ctcgatccaatgcaagctgatcttgttggaatttctttaggactgccagatggaaaagct
tgctatatcccaattgcacataaaaaggctcaacaacagctcacacttggcgatttcgct
tcttccgaaagtgaagccttaaagcagatccctttaagtcagatagtggatcttctaagt
cccctcatggctgatccctctattttgaaggttggtcataatattaaatatgatttactg
gtcttagcgcgttatggatttaatctcgatactatcgatgacacgatggtgatgtcgtat
gttttagatggcacaaagaatggccatggaatggacgaattagcaaaactgcatctgaat
tataaaactattacttttgaagaagtcgcgggtaccggtaaaaaccaaattacgtttgat
tatgttgatttgaaaagagctttagaatatgcagctgaagatgctgacattaccttcagg
cttcatacgcttttcaaaaaaagattggtgaccgagtctgctacaagtgtttatgaaaac
attgatcgtccgctcatacctgttctgaaggatatggagcagacgggggttaagattgat
gtcaattatcttgatcaattagggaaagagtttcaaaaaagattgttagagctagaaaag
gaaatccatggattggctggtgaggactttaacataggatcaccaaagcaattgggagaa
gttctttatgataaactcaagctacctggagcgaagaaaagcaagctaggcgcttatgta
accgatgcagacacactagaaaccctcgcgggacaaggaatagttttggcggagcgtgta
ctcgattggcgacaactcgcaaaacttaaaagtacatacacagatgctttggtgagacaa
attaacccaaagacactaagacttcatacctcatatgcgatgactatcacttccacggga
agattgtcatctagtaatcctaatctacaaaatatccccattcgaacagaagaaggacga
aaaatacgtcgcgcttttatacctgaagtaggatttagtcttatgtcacttgattattca
caaatcgagttaaggttattagcttgtatggcagatattgagtccttaaaagaagcattc
agaaaaggctatgatattcatgctttaacagcttcagaagtgtttaatgttccttttgaa
tcagtgagtccagaattacgtcgtcaagccaaggcaattaatttcggcattatctatggc
atgagtgcttttggtttatcgcagcaacttaaaatatcaagagaagaggctgggcaatat
ataaaagcttatcacctcaaatatccaggaattacacaatacatggaggctaccaaagaa
aatgccagacggcagggtttcgttgaaacaatgtttggtcgtaaatgttatatcaatagt
attctagataaaaatcctgcccgtaagaattttgctgaacgtcaagccataaatgctccc
ctccaaggatctgcggctgatattattaaaattgccatgtgtcatattaagcccgtgctt
acaaaagaaaacttaaaagcaagaatgctcttgcaggtccacgacgagcttatttttgaa
gtccctgaaacacaagttgagttgacagctaaaatcgttaaggaaacgatggaaacagct
gtaaggattgatgtgcctatgattgccgatattggcataggtcataattgggccgacgcg
cattaa
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