Candidatus Nucleicultrix amoebiphila: GQ61_01990
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Entry
GQ61_01990 CDS
T04833
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
naf
Candidatus Nucleicultrix amoebiphila
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naf03016
]
GQ61_01990
Enzymes [BR:
naf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GQ61_01990
Transfer RNA biogenesis [BR:
naf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GQ61_01990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARN84308
UniProt:
A0A1W6N3G4
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All DBs
Position
complement(421881..423050)
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AA seq
389 aa
AA seq
DB search
MDIIATTGDLKTFCEQLLAEDGHEDGFITIDTEFIREKTYWPILCLIQIAGSQRTGIIDP
LDQAIDLDPLFTLMQDERVLKVFHASRQDLEIFYKLTHQLPKPVFDTQVAAMVCGYGESV
SYESLVNDLAQARLDKSSRFSDWSKRPLTKKQLEYALGDVIHLRVVYKKLKERLLKQDRL
SWIQEEHAVLLEPETYIMRPEEAWRRIRLAKTTGEYLIRLKEMAAFRESEAQKKNVARGR
LIKDEVLSNLAVYNPTDRVSFDGIWRKIQPGLTKDLSHGLFEVIMRAQKIPENDWPQLPG
RPKALSKQILQKVEFLKFLLKIKSKDHHVAEKLLATSSDIEKLALDESKADVMALHGWRF
EVFGKDALSLLGGEMALALKGNQLQLIPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggatattatagcgacgaccggtgatctaaaaaccttttgtgagcaattgcttgcggaa
gatggtcatgaagatggttttattactattgatacagagtttatccgtgaaaagacttat
tggcctatattgtgtttaattcaaatcgcgggaagccaacgcactgggattatagatcct
ttagatcaggcaattgatttagatccgctctttaccttgatgcaagatgagcgtgttctc
aaagtgtttcatgcatcgcgtcaggatttagaaatattttataaactaacccatcaatta
ccgaaacccgtattcgacacacaagttgcagctatggtttgtgggtatggtgaatctgtg
tcctatgaatctttggtaaacgatttggcccaagcaagacttgataaatcctctcgtttt
agtgattggtcaaaacgaccattgactaaaaagcaacttgaatacgctttaggagacgtt
attcatctgagggttgtctataaaaaattaaaagaacgcttgcttaaacaagatcgactc
agttggattcaagaagaacatgctgtgctcttagagccagaaacctatattatgagacca
gaggaagcatggcgacggatccgtttggctaaaacaacaggtgaatatctcatacgttta
aaagagatggcagcgtttcgtgaatcagaggctcagaaaaaaaatgttgcaagaggacgc
cttattaaagatgaagtgctctccaatttggctgtttataatcccactgatagagtgagt
tttgatggaatttggcgtaaaattcaacctggtttaaccaaagacttaagtcacggactt
tttgaagtaattatgcgagcgcagaagattcctgagaatgattggcctcaactaccaggt
cgtccaaaagctcttagcaaacagattttgcaaaaagtagaatttttgaaatttttgtta
aagattaaatcgaaagatcatcatgttgctgagaaacttttagctacgagttctgatata
gagaaattggcgctcgatgaatcgaaagctgatgtgatggctttgcatggctggcgtttt
gaggtttttggcaaagatgctctaagtttactgggcggagaaatggctttggccttaaag
gggaatcaacttcaattaattcccctttga
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