Candidatus Nucleicultrix amoebiphila: GQ61_03740
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Entry
GQ61_03740 CDS
T04833
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
naf
Candidatus Nucleicultrix amoebiphila
Pathway
naf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQ61_03740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naf03019
]
GQ61_03740
03016 Transfer RNA biogenesis [BR:
naf03016
]
GQ61_03740
Enzymes [BR:
naf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GQ61_03740
Messenger RNA biogenesis [BR:
naf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GQ61_03740
Transfer RNA biogenesis [BR:
naf03016
]
Prokaryotic type
tRNA degradation factors
GQ61_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_DUF2096_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
ARN84570
UniProt:
A0A1W6N3V2
LinkDB
All DBs
Position
747994..750108
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AA seq
704 aa
AA seq
DB search
MFKIHREEIEWGGRTLSIETGKVARQAEGAVVITYGQTSLLCTVAINKSPSEEVGFFPLT
VHYQERSFAAGKIPGGFFKRDGKPSEKAVLTSRLIDRPIRPLFPENFRYETQIICSLLSH
DMENDPDAIAIIGASAAVALAGIPFHGPLAGARVGYIDGKLVLNPTSEQMQNSTLDLCVA
GTEDGVLMVESEAKELSEETLLEAVMFGHKSFQPVLKAINKLVKAAGRKAWDMPEKSDIQ
KSVAKALKKIAEDGLRSAYSEKKKQDRIQKIELVKQKALESIVDEDTPENVVLSEFKNLE
KDIVRGDLLKNKIRIDGRDLETIRPISAEVGIIPRVHGSALFTRGETQALVVTTLGTSQD
EQIIDAIEGEYRENFLLHYNFPPYSVGEVGRVSSPGRREIGHGKLAWRAVHPMIPTKDKF
PYTLHVVSEVTESNGSSSMATVCGSSLALMDAGVPIEKPVAGIAMGLIKEGKKFAVLSDI
LGDEDHLGDMDFKVAGSADGVTALQMDIKVTGITEEIMQVALTQAKQGRLHILKAMGEAI
DQSRDAISPHAPRIESIQVAKDKIREIIGPGGKTIREICETTGTRIEIKDDGTVDIAGTD
EEAIKAAMDRIRFIVAEPEVGNIYKAKVAKLMDFGAFVDYFGGRSGLVHISQLATQRVES
VKDVVNVGDEVYVKLIGFDERGKAKLSMKVVDQETGQEITNQGA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatacaccgcgaggaaatcgaatggggtggacgcactctttcaattgagacg
ggtaaggttgcacgacaagcggaaggggctgttgtcattacttatggacaaacaagcctc
ttgtgcacagtcgctattaacaaatcaccttcagaagaagtgggttttttccctctcact
gttcactaccaagaaagatcttttgcagcaggcaaaatacctggtggttttttcaaacgt
gatggtaagccttctgaaaaggctgttttaacatctcgtttgattgatcgtccgattcgt
cctctctttccagagaatttccgctatgaaacacaaatcatttgtagcttgcttagtcat
gatatggaaaacgatcctgatgctattgccattattggtgcttcagcggccgttgctctt
gctggcattccttttcatggaccattggcaggtgcacgtgtaggctatattgacgggaaa
cttgtactgaaccccacatctgagcaaatgcaaaattcaactttagatctttgtgtagct
ggtacggaagacggcgttttaatggtagaatctgaagcaaaagaactttctgaagaaact
ctccttgaagcggtaatgttcggacacaagtctttccaaccagttttgaaggctattaat
aaactggtcaaagcagcaggacgtaaagcctgggatatgcccgaaaaatcagatatacaa
aagagtgttgctaaagccttgaagaaaattgcggaagatggcctccgcagtgcttatagt
gaaaagaaaaagcaggaccgcattcagaaaattgagcttgttaaacaaaaagctttagaa
tctatcgtagacgaagacaccccagagaatgttgttcttagcgaatttaaaaatcttgaa
aaagatattgttcgcggtgatctcttgaaaaacaaaattcgcattgatggtcgtgatcta
gaaaccattcgccccattagcgcagaagttggtattatcccacgcgtacatggtagcgcc
ttgtttacacgtggtgaaactcaagccttggtcgtaacgactctcggaaccagccaagat
gaacaaattatagatgctattgaaggcgagtaccgcgagaatttcttgctgcattacaac
tttcctccctattccgtgggtgaagtgggtcgtgtaagttcaccagggcgtcgtgaaatt
ggtcatggaaaacttgcttggcgtgctgttcatcccatgattccaacaaaagataagttt
ccttatacattgcatgttgtctctgaagttactgagtctaacggatcgtcttccatggca
acagtttgtggaagctctctagcacttatggatgcaggcgttcccattgaaaagccagta
gctggtatagccatggggctcataaaagaaggcaagaaatttgctgttctttcagatatt
ttgggcgacgaagaccatttaggcgatatggactttaaagttgctggatctgccgatggc
gtaactgccctacaaatggacattaaagtcactggcattactgaagaaattatgcaggtt
gcccttactcaagctaaacaggggcgtttgcacattctcaaagctatgggagaagccatc
gatcaatctcgcgacgctatcagtcctcatgcgcctcgcattgagagcattcaagtagca
aaagataaaatccgtgaaatcattggcccaggcggaaaaactattcgtgaaatttgcgaa
acaacaggcacgcgtattgaaattaaagatgatggcactgtagacattgctggtaccgat
gaagaagcaattaaagcagctatggacagaattcgttttatagttgcagaacctgaagtc
ggtaatatttataaagctaaagttgcgaaattaatggatttcggtgcgtttgttgattac
tttggtggacgcagtggtctcgtacatatctctcaattggctactcaacgggttgagtca
gtaaaagatgtggtcaacgtaggtgatgaagtttatgtaaagcttatcggttttgacgaa
cgtggaaaagccaagctgagcatgaaagttgttgaccaagagactggccaagaaattacg
aatcaaggagcctag
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