Candidatus Nucleicultrix amoebiphila: GQ61_04195
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Entry
GQ61_04195 CDS
T04833
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
naf
Candidatus Nucleicultrix amoebiphila
Pathway
naf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GQ61_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naf03400
]
GQ61_04195
DNA repair and recombination proteins [BR:
naf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GQ61_04195
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GQ61_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_19
UB2H
AAA_22
AAA_16
T2SSE
Microtub_bd
adh_short
DUF87
HAD_2
Motif
Other DBs
NCBI-ProteinID:
ARN84641
UniProt:
A0A1W6N4E2
LinkDB
All DBs
Position
complement(838198..840243)
Genome browser
AA seq
681 aa
AA seq
DB search
MIMANKLFSLQSSFEPAGDQPQAIRQLTEGLNAGEVNQVLLGVTGSGKTFTMAHVIQSLS
RPALILAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKEASINE
QIDRMRHSATRALLERQDVIIVASVSCIYGIGAVETYSKMVVDLEVGASIEQRELLKQLV
ILQYRRNDIGFIRGSFRVSGDTIEIFPSHLDSRAWRISFFGDEIESIDEIDPLTGKKEAT
LNAVRLYGNSHYITPQPTIQQAIKQIQAELKIRLEEFAAASKHIEYQRLKERVTFDIEMM
AATGMCPGIENYSRYLTGRAPGEPPPTLFEYLPKNALLLVDESHVSVPQIRGMYKGDASR
KSTLAEYGFRLPSCVDNRPLKFEEWEKMRPQTVFISATPGPWELEQTKGIFTEQVIRPTG
LIDPVCIVRPTTHQVDDLMAECREVVAKGYRILITTLTKKMAEALSEYLNETGVKARYIH
SDVETLERIEIIRDLRLGIFDALIGINLLREGLDIPECGLVAILDADKEGYLRSKTSLIQ
TIGRAARNVDGRAILYADIMTQSLTAALEETSRRRERQQAYNAAYGITPETVKKSINNIL
ESVYEQDHTTIDLNLPEEMQLQGKDGKQMMKELEKKMLAAASNLEFEEAAKYRDVLKRLE
NQDLEISITTNRTKFQKRRRS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
ataatcatggctaacaaactttttagtctacagtcttcttttgagccagcgggggatcaa
cctcaagccattcgccagctgacggaaggtcttaatgcaggtgaagtaaaccaagttctt
ttaggggttacagggtcaggtaaaacctttacaatggctcatgtaatccaaagtttgagt
cgtcctgcattaatcttagccccaaataaaactctagcagcgcagctttatggtgagatg
aaagagtttttccctaacaatgcagtggaatatttcgtttcttattatgattattatcaa
ccagaagcttatgttcctcgttcagacacgtatattgaaaaagaagcttccatcaatgag
caaattgatcgtatgcggcactctgcaactagggctcttttagagcggcaagatgttatt
atcgttgcgagcgtctcatgtatctatggtattggcgctgttgaaacctatagtaaaatg
gtagtggacttagaagttggcgcttctattgaacaaagagaactcttaaaacaattagta
atacttcaatatagaagaaatgatatagggtttatacgaggaagttttcgcgtcagtgga
gatacaatcgaaatttttccatctcatttggatagtagagcttggcgaatttcatttttt
ggagatgaaatagaatctattgatgaaatagatcctttgactgggaagaaagaagcaacg
cttaatgcagtgcgtctttatggaaatagccattacataacgccacaaccaacgattcag
caggccattaagcagattcaggcagagctcaaaattcgtttagaggaattcgcggctgct
tcaaagcatattgaatatcagcgccttaaggaacgcgttactttcgatattgaaatgatg
gctgctacagggatgtgtcccggcattgaaaattattccagatacctgacaggtcgtgca
ccaggagagcctccgccaactctatttgagtacttacctaaaaacgcccttcttcttgtt
gatgaaagtcatgtttctgttcctcagatacgagggatgtataagggagatgcttctcgt
aaatcgacgcttgctgaatatggatttcgtttaccttcttgcgttgacaatcgaccatta
aagtttgaagaatgggagaaaatgcgtcctcagacagtgtttatttcagcaacaccaggt
ccttgggaattagaacagacaaaagggatttttacagaacaagtgattcgccccacaggt
ctcattgatccagtctgtattgtgcgtccaacgacgcatcaggttgatgatctaatggct
gagtgtagagaagttgtagccaaagggtatcgtattcttattacaacattaactaaaaag
atggcagaagcgctgagcgaatatttaaatgaaacaggagttaaagctcgttatatccac
tctgatgttgagactctggagcgcatagaaattatccgtgacttaaggttggggatattt
gatgctttgattggcattaacttattgagagaaggattagatattccagagtgtgggtta
gtggccattttagatgcggataaagagggatatttgcgttctaaaacatctttaatccaa
acgattggacgagcggcgcgcaatgttgatggtcgagctattctttatgcagatattatg
acccagtcgttaaccgccgctttggaagaaaccagtcgtcgtcgcgaaagacaacaagcc
tataatgcggcctatggtattacgcctgaaacagttaaaaaatcaatcaacaatattcta
gaaagcgtttatgagcaggatcatacaaccatcgaccttaatttacccgaagaaatgcag
ctgcaaggaaaagatggaaaacaaatgatgaaagagttagaaaagaagatgttggcagca
gcaagtaatcttgaatttgaagaagctgcaaaatatagagatgttttgaagcgtctagaa
aatcaagatcttgaaatttctatcactacaaatagaacaaaatttcaaaaaagacgtcgt
tcgtaa
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