Candidatus Nucleicultrix amoebiphila: GQ61_08195
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Entry
GQ61_08195 CDS
T04833
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naf
Candidatus Nucleicultrix amoebiphila
Pathway
naf03420
Nucleotide excision repair
naf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GQ61_08195
03430 Mismatch repair
GQ61_08195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naf03400
]
GQ61_08195
Enzymes [BR:
naf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GQ61_08195
DNA repair and recombination proteins [BR:
naf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GQ61_08195
MMR (mismatch excision repair)
Other MMR factors
GQ61_08195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
DUF3553
AAA_22
ResIII
TssC
Motif
Other DBs
NCBI-ProteinID:
ARN85272
UniProt:
A0A1W6N667
LinkDB
All DBs
Position
complement(1611188..1613359)
Genome browser
AA seq
723 aa
AA seq
DB search
MLPPYLQSLNEQQREAVETLEGPLLVLAGAGTGKTRVLTTRIAHILGNHKALPSQILAVT
FTNKASYEMRERISSLIGRTVEGLWLGTFHSLCVRILRRHAERINLKTNFTILDTDDSLR
LIKQIQKAENIDDKKWPPRAILGMISLWKDRGLGPDQIDKNNLPNQYGPKNPALTIYPIY
QERLRILNAVDFGDLLLHCLTLFTQCTDILDFYQHQFRYILVDEYQDTNIAQYLWLRLLA
QGHKNICCVGDDDQSIYGWRGAEIANILKFEHDFPGAHIIRLEQNYRSTPHILGAASGLI
AKNTGRLGKTLWTEADAGEKVFIKSVWDGEEEARYVGDEIEALQRNKFSLSKMAILVRAS
HQTREFEERLLTLGIPYRVIGGPRFYERLEIRDALAYLRLINEPNDSLAFERIINTPKRG
MGSVALQNLHHISRSEGVSLMASAYKIIETDELRGQTRNTLANFLKDVDRWRQQVSFMSP
SDLAKMVLDESGYTEMWQRDKSPDAPGRLENLKELVVALEEFETIESFLDHVSLVMENSS
NQNVDSISIMTLHSAKGLEFDIVFLAGWEEGLFPHQRSLGETGLKGLEEERRLAYVGLTR
ARQRAYIIYAVNRKIHGSWQSSLPSRFIGELPKEHVDSQTAVTALSSNFKIRDVTGPARY
LPTSSGKKSLSSASSFNKFEVGTRVFHIKFGYGQVIDAHGDKVDVDFEHSGLKKVITSFL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaccgtaccttcaatccctcaatgaacaacagagagaagcagtcgaaactctc
gaaggacctcttttagtattggctggagccggcacaggtaaaacccgcgtgttaacaacg
cgaatagcgcacattcttggtaatcataaagccctccccagtcaaattttggcagtaaca
tttaccaacaaagcttcttatgaaatgcgggaacgtatcagttctttgattggacgaacc
gtagaggggttatggcttggaacatttcattctctttgtgtgcgtattttaagaagacat
gcggaacgcattaatctgaaaaccaatttcaccatccttgatactgatgattctttacgc
cttattaaacagattcaaaaagcagaaaacattgatgacaagaaatggcctcctcgtgcc
attctaggtatgattagcctttggaaagatcgaggtcttggccctgatcaaattgataag
aataatttacccaaccaatatggacctaaaaatccagctctaacaatttaccctatttat
caagaacgattgagaatccttaatgctgttgattttggggatctccttctccattgtttg
actctctttactcaatgcacagatattcttgatttttaccaacatcagtttcgttatatt
ttggttgatgaatatcaagacaccaacattgcgcaatacctttggttgcgtcttcttgct
caaggacataaaaatatttgctgtgttggagacgatgatcaatctatttacggttggcgt
ggcgctgaaattgctaatattttgaagttcgagcacgattttccaggcgctcacattatt
cgattagaacaaaactatcgatctacacctcatattttaggagctgcatctggtcttatt
gctaaaaatactggacgccttggtaaaacactttggaccgaggcagatgcaggagaaaaa
gtcttcataaaaagcgtttgggatggtgaagaagaagcgcggtacgtaggcgatgaaatt
gaagcattacaaaggaacaaattctctctttcaaaaatggctatccttgtcagagctagc
catcaaacccgcgaatttgaagaacgtctcttaactttaggtatcccttatcgtgttatt
ggcggtccaagattctatgaacgtcttgaaatccgagatgctttagcctatttacgactg
ataaacgaacccaatgacagtctcgcttttgagcgtattatcaacacgcctaaacgtgga
atggggagcgttgctttgcaaaacttgcatcatatttcccgaagtgaaggtgtttctctc
atggcctcggcttataagataattgagaccgatgaacttcgtggtcaaacacgcaatact
ctcgctaattttttaaaagatgtcgatcgttggcgtcagcaagtaagttttatgtcccca
agtgatcttgcaaaaatggttctggatgagtctggatatactgaaatgtggcaacgagat
aaatctcctgacgctcctggtcgactggaaaacttaaaagaacttgtggtcgctctggaa
gagtttgaaaccattgaaagctttttagaccatgtgagtttagtcatggaaaactcaagt
aatcaaaatgttgatagtatcagtataatgactttgcacagcgccaaaggtcttgaattt
gacattgtttttctcgctggttgggaggaaggactgttcccccatcaacgcagtcttgga
gaaactggattaaaagggttagaagaagaaagacgactcgcttatgttggtctcacacgc
gctcgacagagagcttacattatttatgcagtgaatcgcaaaattcatgggagctggcag
tccagcctaccttcgcgcttcattggcgaacttcctaaggaacatgttgattcacaaacg
gctgtcacagctctgtcttctaattttaaaattcgcgatgttactggtccagcacgatat
ctaccaacttcatcgggaaaaaagtctctatcttcagcttcttcttttaataaatttgaa
gttgggacccgagtttttcatatcaaatttggttatgggcaagtgattgatgctcatggt
gataaagtagatgttgactttgaacattcgggccttaaaaaggttatcacaagttttttg
gagaaagcctaa
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