Nocardia arthritidis: F5544_02030
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Entry
F5544_02030 CDS
T06735
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nah
Nocardia arthritidis
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nah03032
]
F5544_02030 (topA)
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_02030 (topA)
Enzymes [BR:
nah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F5544_02030 (topA)
DNA replication proteins [BR:
nah03032
]
Prokaryotic type
DNA Topoisomerases
F5544_02030 (topA)
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F5544_02030 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIS08327
UniProt:
A0A6G9Y5G4
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All DBs
Position
444749..447754
Genome browser
AA seq
1001 aa
AA seq
DB search
MFNRRHRLPHTAHRAHQRRAGREGKVYSPVATRDRGAADQGRPLRRLVIVESPTKARKIA
PYLGRNYTVEASVGHIRDLPANAADVPAKYKGQPWARLGVDVDHDFEPIYVVNPDKKTKV
TELKSLLKDADELYLATDPDREGEAIAWHLLETLKPKVPVRRMVFHEITEPAILAAAADT
RELDSDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVATRVIVQRERERMAF
RSAEYWDIAAILDAGTGEGADAANPRTFGARLVQVDGARVASGRDFGPDGQLKTANGVVV
LDESHARRLATALDGVDLVVASAESKPYTRKPYPPFMTSTLQQEAGRKLRFNAEHTMRVA
QALYENGYITYMRTDSTTLSESAIAAARAQATQLYGAEFVHPTPRQYNRKVKNAQEAHEA
IRPAGDTFATPGELHSRLDRDQFRLYELIWQRTVASQMADARGTTLTLRIAGTAGSGEQC
VFSASGRTITFAGFLKAYVESVDEEAGGQSDDAESRLPALEQGQAVTAVELNPDGHATNP
PARYTEASLIKALEDLGIGRPSTYSSIIKTILGRGYVYKRGSALVPSWLAFAVTGLLEEH
FGRLVDFDFTAAMEDDLDAIAGGREQRGNWLSSFYFGGEHGVEGSVARSGGLKKMVGDRL
DDIDAREVNSIKLFTDAEGRDIVLRVGRYGPYLERMITNPDDPQGDPISQRANVPNDPPP
NDLPPDELTLEKAEELFGKTQQEGRSLGIDPETGHEIVAKEGRFGPYVTEVLPESGSGDG
EAPATKTTKKAAAAVKPRTGSLFKSMDLETITLDDALKLLSLPRVVGKDPESGDEITAQN
GRYGPYLKKGTDSRTLSSEDQIFSVTLEEALKIYAEPKRRGRQAANAAPLRELGNDAATG
MPMVIKDGRFGPYVTDGETNASLRKGDDVATITDERASELLADRRARGPVKKVAKKAAAK
KTAAKKTTAKKAAVKATTTKTVAKKTPAKKAAAKKTGVGKA
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccgtcgccaccgcttgccccacaccgcgcaccgggcgcaccagcgtcgcgcg
ggtcgagaaggaaaggtgtattcgccggtggcaacacgagaccgcggtgcagccgaccag
ggccgtcccctgcgtcgtctcgtgatcgtcgagtccccgaccaaggcccgcaagatcgcg
ccgtacctgggtcgcaattacacggtcgaagcctcggtcggtcacatccgggacctgccg
gcgaacgccgccgacgtgcccgccaaatacaagggccagccctgggcgcggctcggcgtc
gacgtcgatcacgatttcgaacccatctacgtggtgaacccggataagaagaccaaggtc
accgagctcaagagcctgctgaaggacgccgacgagctctacctggccaccgaccccgac
cgcgagggcgaggccatcgcctggcatctgctggagacgctgaagccgaaggtgccggtg
cgccggatggtgttccacgagatcaccgaacccgccatcctggcggccgccgccgacacc
cgtgagctcgactcggatctggtcgacgcgcaggagacccggcgcatcctggaccggctg
tacggctacgaggtcagcccggtgctgtggaagaaggtcatgccgaagctgtcggcgggc
cgggtgcagtcggtggcgacgcgggtcatcgtgcagcgcgagcgcgagcggatggcgttc
cgctcggccgagtactgggatatcgccgcgatcctcgacgcgggcaccggcgagggcgcg
gacgccgccaacccgaggaccttcggtgcgcgcctggtgcaggtggatggcgcacgcgtg
gcctcgggccgcgacttcgggcctgacggacagctgaagaccgcgaatggcgttgtcgtg
cttgacgagtcgcatgcgcggcggttggccaccgcgctggacggcgtcgatctggtggtg
gcgtcggcggagtcgaagccgtacacccgcaagccgtatccgccgttcatgacctcgacg
ctgcagcaggaggcggggcgcaagctgcgcttcaacgccgagcacaccatgcgggtggcg
caggcgctgtacgagaacggctacatcacctatatgcgtaccgactcgaccacgctgtcg
gagtcggcgatcgccgcggcccgtgcgcaggccactcagctctacggcgcggaattcgta
catcccaccccgcgtcagtacaaccggaaggtgaagaacgcgcaggaggcgcacgaggcg
atccggcccgccggtgacaccttcgcgacgccgggagagctgcattcgcggttggaccgc
gaccaattccggctctacgagctgatctggcagcgcaccgtcgcctcgcagatggccgat
gccaggggcacaacgctgacgctgcggatcgccggtaccgcgggatccggtgagcagtgc
gtgttttcggcctcgggccggaccatcacgttcgccggcttcctcaaggcctatgtggaa
agcgtcgacgaggaggcgggcggtcaatccgatgacgccgaatcccgtttgcccgcactg
gaacagggccaggccgtcaccgcggtcgagctgaatcccgatgggcacgcgacgaatccg
cccgcgcgctataccgaggcctcgttgatcaaggctctcgaagatctcggaatcggccgt
ccctcaacgtattcgtcgattatcaagacgattctgggtcgcggctacgtgtacaagcgc
ggcagcgcgctggtgccgtcgtggttggcattcgccgtaaccggtttgctggaggaacat
ttcggccgtctcgtcgatttcgacttcaccgcggcgatggaggacgatctcgacgccatc
gcgggcgggcgcgagcagcgcggaaattggttgtccagcttctatttcggcggcgagcac
ggcgtcgagggttcggtcgcgcggtccggcgggctgaagaagatggtcggcgaccggctc
gacgacatcgatgccagggaagtcaattcgatcaagctcttcaccgacgccgagggccgc
gatatcgtgctccgggtcgggcggtacggaccgtacctggagcggatgatcacgaatccc
gatgacccgcagggagatccgatctcgcagcgggcaaacgtgccgaatgatccgccgccg
aacgatctgccgccggatgagctgacgctcgagaaggccgaggagctcttcgggaagact
cagcaggagggcaggtcgctcggtatcgatccggagaccggacacgaaatcgtcgccaag
gagggacgtttcggcccgtacgtcaccgaggtgctgccggaatcgggctccggcgatggc
gaggcgcctgccacgaagaccacgaaaaaggctgcggcagcggtcaaaccgcgcaccggt
tcgctgttcaagtcgatggatctggagacgatcaccctcgacgacgcgctgaaactgctt
tcgctgccccgggttgtcggtaaggatccggaatccggcgacgagatcaccgcccaaaac
ggccggtacgggccgtatttgaagaagggcaccgactcgcgcacgctgagcagcgaggat
cagatcttcagcgtgacgctggaggaggcgttgaagatttacgccgagccgaagcggcgc
ggtcggcaggcggcgaacgcggcgccgctgcgtgaactcggaaacgacgcggccaccggt
atgccgatggtgatcaaggacgggcggttcggcccgtacgtcaccgatggcgagaccaat
gccagcctgcgcaagggcgacgacgtcgcgaccatcaccgacgagcgggcctcggaactg
ctcgcggatcggcgggcgcgtgggccggtgaagaaggtggccaagaaggcggcggcgaag
aagaccgcggccaagaagacgacggccaagaaggcggcggtgaaggcgacgaccaccaag
accgtggccaagaagacgcccgcgaagaaggcggcggcgaagaagaccggtgtcggcaag
gcgtga
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