Nocardia arthritidis: F5544_07485
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Entry
F5544_07485 CDS
T06735
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nah
Nocardia arthritidis
Pathway
nah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F5544_07485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nah03021
]
F5544_07485
03019 Messenger RNA biogenesis [BR:
nah03019
]
F5544_07485
Transcription machinery [BR:
nah03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F5544_07485
Messenger RNA biogenesis [BR:
nah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F5544_07485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QIS09402
UniProt:
A0A6G9Y857
LinkDB
All DBs
Position
1692638..1694614
Genome browser
AA seq
658 aa
AA seq
DB search
MSERTDVARSGLTGMLLPQLRALAGELGIRGTSGMRKGDLIAAIKENQAGKPAAKADAKP
VKAEPAGKSEAKASTEAPAKSEARGEQATLDVTPVADPAPAKAAAAPAKTAEPAAKTEAA
AANSAPANPGSTDTAPAAETGEESGRDAGQRGRGRQRRGRDQAQTRSGGENTPTAGDEPK
QDEQGERRRDRNQQGDRNQQGERNGARNSDGARTSESTRNGDGSRGGDRDRDRDRGGDED
EGGRGRRGRRFRERRRGRDRDGGGGGGEARELEIREDDVLQPVAGILDVLDNYAFVRTSG
YLAGPNDVYVSMNLVRKNGLRRGDAITGAVRAPREGDQSNQRQKFDPLVRLDTVNGGDAE
AAKRRPDFSKLTPLYPNQRLRLETQQNKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIM
QDIANAIAVNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIE
RAKRLVEMGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSTALYPPKRFLGAARNIE
NGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKD
ELLLSPDEAAVLHKLRRVLSGLDSHQAIDLLIDRLKKSKNNLEFLMQVSKTAPGAIDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacggaccgacgtcgcacgatcggggctgactggaatgttgttgccgcagttg
cgcgcgctcgcgggagagctcggtattcgaggcacttccggtatgcgcaagggtgatttg
atcgccgccatcaaggagaaccaggccggaaagcccgccgccaaggcggacgccaagccc
gtgaaggccgagcccgccgggaagtccgaggcgaaggcgtcgacggaggcgcccgccaag
tccgaggcccgtggtgagcaagccaccctcgacgtgacgcccgtcgcggaccccgcgccg
gcgaaagcggctgcggcaccggcgaagacggccgagcccgccgcgaagaccgaagccgcg
gcggcgaattccgctcccgcgaatccgggttccaccgacaccgcccccgcggccgagacc
ggcgaggagtccggtcgtgatgcgggtcagcgcggtcggggccgccagcgccgcggccgg
gatcaggcgcagacgcgttccggtggggagaacacccctaccgcgggtgacgagcccaag
caggacgagcagggcgagcgtcgccgcgatcgcaatcagcagggcgaccgcaatcagcag
ggcgagcgcaacggcgcacgcaacagcgatggcgcccgcaccagcgagagcacgcgcaac
ggtgacggcagccgcggcggcgaccgcgaccgggatcgcgaccgcggcggtgacgaggac
gagggcggtcgcggacggcggggtcgccggttccgggaacgtcgtcgtggtcgcgaccgc
gatggcggcggtggcggcggcgaggcccgcgagttggagatccgcgaggacgatgtgctg
cagccggtggcgggcatcctcgacgtgctggacaactacgcgttcgtccgcacctcgggc
tacctggccgggccgaacgacgtctacgtctcgatgaacctggtccgcaagaacggcctg
cgccgcggtgacgcgatcaccggcgcagtgcgcgcgccgcgcgagggcgaccagagcaat
cagcggcagaagttcgatccgctggtgcggttggacacggtcaacggcggtgatgccgag
gcggccaagcggcggccggacttcagcaagctcaccccgctgtacccgaaccagcgcctg
cggctggagacccagcagaacaagctgaccacgcgcgtgatcgatctgatcatgccgatc
ggtaaggggcagcgtgcgctgatcgtttcgccgccgaaggccggtaagacgacgatcatg
caggacatcgcgaacgctatcgcggtgaacaaccccgagtgctacctgatggtggtgctg
gtcgacgagcgtcccgaagaggtcaccgatatgcagcgttcggtgaagggcgaggtcatc
gcctcgaccttcgaccgcccgccgtcagatcacacctcggtcgccgaattggccatcgag
cgcgccaagcggctcgtcgagatgggcaaagacgttgtggtgctgctggattcgatcact
cgactgggtcgcgcgtacaacaactcgtcgccggcttccggtcgcatcctgtccggtggt
gtcgactcgaccgcgctctacccgccgaagcgattcctcggcgcggcgcgcaatatcgag
aacggtggttcgctgacgatcatcgccaccgccatggtggagaccggttcgaccggtgac
acggtgatcttcgaggagttcaagggcaccggtaacgccgaactcaagctggaccgcaag
atcgcggagcggcgagtgttcccggcggtggacgtcaacccgtccggtactcgtaaggac
gagttgctgctcagccctgacgaggccgcggtgctgcacaagttgcggcgcgtactgtcc
ggcctggattctcaccaggcgatcgatctgctcatcgaccgtttgaagaagtccaagaac
aacctcgaattcctgatgcaggtctccaagaccgcgccgggagcgatcgacgagtga
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integrated database retrieval system
