Nocardia arthritidis: F5544_15035
Help
Entry
F5544_15035 CDS
T06735
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nah
Nocardia arthritidis
Pathway
nah03030
DNA replication
nah03430
Mismatch repair
nah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F5544_15035
03430 Mismatch repair
F5544_15035
03440 Homologous recombination
F5544_15035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nah03032
]
F5544_15035
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_15035
Enzymes [BR:
nah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F5544_15035
DNA replication proteins [BR:
nah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F5544_15035
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F5544_15035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QIS10891
UniProt:
A0A6G9YCE1
LinkDB
All DBs
Position
3399980..3401947
Genome browser
AA seq
655 aa
AA seq
DB search
MEDHFTGNARRNSSNDPDNRGGFSVARYLSYPRPTLHAVSVPHSARQMAFDDLDTPLYDT
TFVVVDLETTGTSPGADAITEIGAVKVRGGEVLGEFATLVNPGRAIPPAVVHVTGITTAM
VCAAPRIEAVLPGFLEFASGAVLVAHNARFDMAFLRAAAAGMDAAWPNPQVLCTVKLARR
VLGRDEAPTVRLGVLARVLGAATQPTHRALDDARATVDVLHALIARVGNQGVHSLTELLD
YLPGVTSGQRAKRVFAQDLPSAPGVYLFRGPADEVLYIGTAVNLRRRVRNYFTGSETRGR
MKEMVALATRVDHVVCAHGLEAGVRELRLLVAHAPPYNRRSKFPKRGWWITLTEEAFPRF
AIVRGPTRDAVGPFPSRLDATEIAVVIAEFTGLRTCTTRLPRGGRHVCPPAVVGGCPAAS
PTAINRETYAPAPALVRALFAGRSDAPLRAMFDRIETHSRAEHFEAAARLRDRTAAVVRA
LYRTQRLAALARIAELIVAHPDGARGWEFSVIRYGRLAGAGVAPRGVPPMAVVEQIVAAA
ETVVPEGETSLPDLASDPPVRTDSATEDAFRRRDDDKGPIDIGPIDKDAIDNAPPLRGAS
PEEVGLIARWLTKPGVRIVRTSEGYREPIFGAARWLGWAEVAARARSGEAEYLDH
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcatttcacgggcaacgcgcggagaaactcgtcgaacgatccggacaatcgt
ggtggcttttccgtcgcccggtacctgtcgtacccgcggcctacgctgcacgccgtgtcc
gtcccccattcggcccgtcagatggccttcgacgatctcgacacgcccctctacgacacc
accttcgtggtcgtcgacctggagaccaccgggaccagcccgggcgccgacgccatcacc
gagatcggcgccgtcaaggtgcgcggcggcgaggtgctcggcgaattcgccaccctggtg
aacccgggacgggcgatcccgcccgcggtcgtgcacgtcaccggcatcaccaccgccatg
gtgtgcgcggccccgcgcatcgaggcggtgctgcccggattcctggagttcgcgtccggt
gcggtgctcgtcgcgcacaacgcccgcttcgatatggccttcctgcgcgccgccgcggca
ggcatggatgccgcatggccgaatccgcaggtgctgtgcaccgtgaagctggcccggcgg
gtactcggccgggacgaggccccgacggtgcggctcggcgtgctggccagggtgctcggc
gcggccacccagccgacgcaccgcgcgctcgacgacgccagggcgacggtcgacgtactg
cacgcgctcatcgcgcgcgtcggcaatcagggcgtgcacagcctgaccgaactgctcgac
tatctgcccggcgtcacctccggccagcgcgccaaacgtgttttcgcacaggatctgccg
agcgcgcccggcgtctacctgttccgaggtccggcggacgaggtcctctacatcggcacc
gcggtgaacctgcgccgccgagtgcgcaactacttcaccggatccgagaccaggggccgg
atgaaggagatggtcgccctggccacccgcgtcgaccatgtggtctgcgcacacgggctg
gaggcgggggtgcgtgagctgcgcctgctcgtcgcgcatgccccgccgtacaaccgccgc
tccaaatttcccaagcgcggctggtggatcacgctcaccgaggaggcgttcccgcgcttc
gccatcgtccgcggcccgacccgggatgccgtcgggcccttcccgtcccggctggacgcc
accgaaatcgccgtcgtcatcgccgaattcaccgggctgcggacctgcaccacccgcctg
ccccgcggcgggcgacacgtctgcccgcccgcggtggtcggcggctgcccggccgcgtca
cccaccgctattaatagggagacatacgcgccggcgcccgcgctggtccgtgccctgttc
gccggacgatccgacgcgccgctgcgagccatgttcgaccgcatcgaaacccactcgcgg
gccgagcatttcgaggcggccgcccggctgcgcgaccgcaccgccgccgtcgtccgtgcc
ctgtaccgcacccagcgactcgccgcgctcgcccgcatcgccgaactgatcgtcgcgcac
ccggacggcgcgcggggctgggagttctccgtgatccgatacggacggctggcgggcgct
ggcgtcgcgccgcgcggcgtcccgccgatggccgtcgtcgaacagatcgtcgccgcggcg
gaaacggttgtcccggaaggagagacatcgctgcccgatctcgcgagcgatccgccggtg
cggacggactcggcgaccgaggatgccttccgtcgtcgcgatgacgacaagggccccata
gatataggccctatagataaggacgcgatagataacgctccacccttgcgcggcgcgtcg
ccggaggaggtcggcctgatcgcccgctggttgacgaagcccggagtgcggatcgtccgg
accagcgagggctatcgcgagccgatcttcggtgcggcccggtggctcggctgggcggag
gtggcggcgcgggcgcgatcgggggaggccgaatatctcgaccattag
DBGET
integrated database retrieval system
