KEGG   Nocardia arthritidis: F5544_16045
Entry
F5544_16045       CDS       T06735                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nah  Nocardia arthritidis
Pathway
nah03030  DNA replication
nah03410  Base excision repair
nah03420  Nucleotide excision repair
nah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F5544_16045 (polA)
   03410 Base excision repair
    F5544_16045 (polA)
   03420 Nucleotide excision repair
    F5544_16045 (polA)
   03440 Homologous recombination
    F5544_16045 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nah03032]
    F5544_16045 (polA)
   03400 DNA repair and recombination proteins [BR:nah03400]
    F5544_16045 (polA)
Enzymes [BR:nah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F5544_16045 (polA)
DNA replication proteins [BR:nah03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     F5544_16045 (polA)
DNA repair and recombination proteins [BR:nah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     F5544_16045 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F5544_16045 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH_2
Other DBs
NCBI-ProteinID: QIS11089
UniProt: A0A6G9YCY1
LinkDB
Position
3607014..3609746
AA seq 910 aa
MRVSSPTTAERSATASGTDRPTLLLLDGHSIAYRAFFALPAENFKTVTGQTTNAVYGFTA
MLINLLRDEKPTHIAAAFDVNRKTFRTEAYPEYKANRNATPDEFRGQVELTKDVLGALGI
AVMAIEGFEADDIIATITTQAVAEGFRILIVSGDRDSIQLVNDDVTVLYPRKGVSDLTRF
TPEEVQAKYGLTPNQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGDLNTLVDKVDE
VKGKVGDALRANLSSVVLNRQLTEMVRDVPLPYTPEQLAQGPWDREKIHQLFDDLEFRVL
RDRLFETLAPPEPEAEAGFEISGAALEVGAVAGWLAEHAEAGVRHGVSIVGTGTPADGDV
RALAIAAADGESGYIDVSVLTPEDEAALGTWLADPAVPKALHEAKAAMHALRGRGWTLGG
LTSDTALAAYLVRPGQRSFNLDDLSLRYLRRELRAETDAAPQLSLLDEEGAADAELAQAE
MLRARAVVDLAAALDTELEQIESTPLLAEMELPLLGVLATLEEAGIAVDTDQLETLHRQF
SDRVNAAANAAYDVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALESLFEK
TEHPFLEHLLAHRDATRLKVTVEGLLKSVAPDGRIHTTFNQTIAATGRLSSTEPNLQNIP
IRTDTGRQIRDTFVVGSGYQSLMTADYSQIEMRIMAHLSGDEGLIEAFNSGEDLHTFVAS
KAFDIPISEVNPEMRRRIKAMSYGLAYGLSSYGLSAQLKISTAEAKEQMDVYFARFGRIR
DYLYEVVEQARKVGYTETLFGRRRYLPDLDSSNRQRREAAERMALNAPIQGTAADIIKVA
MINVHKAIGAAGLRSRMLLQIHDELLFEVADGEREALETLAREQMSAAIELSVPLEVSVG
VGRSWDAAAH
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgcgcgtgagttcaccgacgactgctgagcgttccgccaccgcgtccgggacggaccgg
ccgaccctgctgctgctggacgggcattcgattgcctaccgcgcgttcttcgcgctgccc
gcggagaacttcaaaacggtcaccgggcagaccaccaacgcggtgtacggcttcaccgcg
atgctgatcaacctgctgcgcgacgagaagccgacgcatatcgcggccgccttcgacgtg
aaccgcaagaccttccgcaccgaggcgtacccggaatacaaggcgaaccgcaatgccacc
cccgacgaattccgcgggcaggtcgaactcaccaaggacgtgctcggcgcgctcggcatc
gcggtgatggcgatcgagggcttcgaggccgacgacatcatcgccaccatcaccacgcag
gcggtggccgagggcttccggattttgatcgtctccggtgaccgcgactcgatccagctg
gtcaacgacgatgtcacggtgctctatccgcgcaagggcgtctcggatctcacccggttc
acccccgaggaggtgcaggccaaatacggtctcaccccgaatcagtatccggattacgcg
gcgctgcgcggcgacccgagcgataacctgcccggcattcccggcgtcggggagaagacc
gcggccaagtggattcgcgaatacggtgatctgaacacgctggtggacaaggtcgacgag
gtgaagggcaaggtcggtgacgcgctgcgcgccaacctgagcagcgtggtgctgaaccgt
cagctcaccgagatggtgcgcgacgtcccgctgccgtacacgccggagcagctggcgcag
ggcccgtgggatcgggagaagatccaccagctgttcgacgatctggaattccgggtgctg
cgcgaccggttgttcgaaaccctagcgccgccggagccggaggccgaggccggattcgag
atcagcggtgcggcgctggaggtcggcgcggtcgccggctggctcgccgagcatgcggaa
gccggtgtgcggcacggcgtttcgatcgtcggcaccggcactcccgcggatggtgacgtg
cgcgcgctcgccatcgccgccgccgacggcgagagcggctacatcgatgtcagcgtgctc
accccggaagatgaggcggcgctgggcacctggctcgccgacccggcggtgccgaaggcg
ctgcacgaggccaaggccgccatgcacgcgctgcgcgggcgcggctggaccctcggcggg
ctcaccagcgataccgcgctggccgcctacctggtccggcccggccagcgcagtttcaac
ctcgacgatctgtcgctgcgctacctgcgccgcgagctgcgcgccgaaaccgatgcggcg
ccacagctctccctgctcgacgaggagggcgcggccgacgccgagctggcgcaggccgag
atgctgcgggccagggcggtcgtcgatctggccgccgcgctcgacaccgaactggagcag
atcgaatccaccccgctgctcgccgagatggagctgccgctgctcggcgtgctcgccacg
ctggaggaggcgggcatcgcggtcgacaccgatcagctggagacgctgcaccggcaattc
agcgaccgggttaacgccgcggcgaacgccgcatacgacgtgatcggcaagcagatcaac
ctgggctcgcccaaacagttgcaggtggtgctgttcgacgaactcgacatgccgaagacc
aagcgcaccaagaccggttacaccaccgacgccgacgcgctggaatcgctgttcgagaag
accgagcaccccttcctggaacatctgctcgcgcaccgcgacgccacccgcctgaaggtg
acggtggagggtctgctgaaatccgttgcgccggacggccggatccacaccacgttcaac
cagaccatcgccgccaccgggcgcctgtcgtccaccgagccgaatctgcagaacatcccg
atccgcaccgataccggcaggcagatccgcgacaccttcgtggtcggctccggctaccag
tcgctgatgacggccgactacagccagatcgagatgcgcatcatggcccacctgtccggc
gacgagggcctgatcgaggccttcaattccggtgaagacctgcacaccttcgtcgcgtcc
aaggcattcgacatcccgatctccgaggtgaatccggagatgcggcggcgaatcaaggcc
atgtcgtacggcctggcctacggcctgagctcctacggtctgtcggcgcagctgaagatc
agcacggccgaggcgaaggagcagatggacgtctacttcgcccggttcggccgcatccgc
gactacctctacgaggtggtcgagcaggcccgtaaggtcggctacaccgaaaccctgttc
ggccgcaggcgctatctgcccgatctggattccagcaaccgtcagcgccgcgaggccgcc
gaacgcatggcgctcaacgcccccatccagggcaccgccgccgacatcatcaaggtggcg
atgatcaacgtgcacaaggcgatcggcgcggcgggcctgcgctcccggatgctgctgcag
atccacgacgaactcctcttcgaggtcgccgatggtgagcgcgaggcattggaaaccctc
gcccgcgagcagatgtccgccgccatcgaactctcggtgcccctggaggtttcggtcggc
gtcggccgcagctgggacgccgccgcgcactga

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