Nocardia arthritidis: F5544_25165
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Entry
F5544_25165 CDS
T06735
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nah
Nocardia arthritidis
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nah03021
]
F5544_25165
Transcription machinery [BR:
nah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F5544_25165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
KORA
HTH_23
MarR_2
HTH_Crp_2
MarR
HTH_24
DUF7343
HTH_Tnp_ISL3
HTH_37
HTH_Tnp_4
MtrG
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QIS12888
UniProt:
A0A6G9YI65
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All DBs
Position
5640180..5641112
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AA seq
310 aa
AA seq
DB search
MTGIKLNCDRYHTHLCRAGAPGTRKILRKNSRGGVTVATEFVADATDFSPARRGRDSYDD
IEPWFDKLAALDTLDPHRNALREHIIELCLPLADHIARRFAGRGEAYEDLVQVARVGLLL
AVDRFDLTRGNSFLSFAVPTVMGEVRRYFRDSGWAVRVPRRLKELQQRIASVTPELAQRL
GRQPTATDLAAELGTDHEEIAQALIAANGYTCDSIDAGTDGGEDAAAAFHEDPLATIDPN
YELVENAIAVAPLIAELPERERRVLELRFGESQTQTQIAERLGLSQMHISRILNRTLREL
RERALESQPA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcattaaactcaactgtgatcgttatcacactcatctttgtcgggccggtgcg
ccgggtacccgaaaaatacttcggaaaaattccagaggaggtgtcacggtggccaccgaa
ttcgtcgctgatgccactgacttttcgccagcgcggcggggccgggattcatacgacgat
atcgagccgtggttcgacaagctcgcggcgctcgacacgctcgatccgcaccgtaatgcg
ttgcgcgagcacatcatcgagctgtgcctgccgctggcggatcacatcgcccgccgcttc
gccggccggggtgaggcgtatgaggacctcgtacaggtcgcgcgggtcggattgctgctc
gccgtcgaccggttcgatctgacgcgcggcaacagcttcctctcgttcgcggtaccgacc
gtgatgggcgaggtgcgcagatacttccgtgacagcggctgggcggtgcgggtgccgcgc
cgcctcaaggagttgcagcagcggatcgcttccgtcacaccggaattggcgcagcggctg
ggccgccagcccacggcgaccgacctcgccgccgagctcggcaccgatcacgaggagatc
gcccaggcgctgatcgccgccaacggctacacctgcgactccatcgacgccggaaccgac
ggcggcgaggacgcggcggccgcgttccatgaggacccgctggccaccatcgaccccaac
tacgagctggtggagaacgcgatagccgtcgccccgctcatcgccgaactgcccgaacgc
gaacgcagggtgctggaactacgcttcggcgagtcgcagacgcagacgcagatcgccgag
cggctcggcctttcgcagatgcatatctcccgcatcctcaaccgcaccctgcgcgaactg
cgcgagcgagcgctggagagccaacccgcctga
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