Nocardia arthritidis: F5544_27165
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Entry
F5544_27165 CDS
T06735
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nah
Nocardia arthritidis
Pathway
nah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F5544_27165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_27165
Enzymes [BR:
nah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F5544_27165
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F5544_27165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PDDEXK_1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QIS13287
UniProt:
A0A6G9YJP5
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All DBs
Position
complement(6091209..6094748)
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AA seq
1179 aa
AA seq
DB search
MTVASTISRIDTAEPFDPIGSLPTGTTVLEASAGTGKTHAIVGLAVRYVAEAGVDITQLL
LVTFSRAATQELRERTRDRFVAVAAALADPLGARTHPDELIRHLAQADPDEVWRRRARLL
TALSDFDAGTIATTHSFCQRMLDELGLAGEHDPGARLVETIDELIGTVVDDLYLNRYARA
AQPFSLKEAHQLGLAAVRDRQARLVPDEGGPAGERVAFAAAVRAETERRKRLSGLRDFDD
LLVLLHEVLADPAHGPRACRRIRERYRVALVDEFQDTDPLQWDILRRAFHGHATLVLVGD
PKQAIYAFRGAEVLSYLDAVAHADTRSELTTNWRSDAGLLAALDHLHGGAALGHRDILVH
PVAATRPWTRLSGPAELITPLRLRCLPRKGAGPLNKSGFPAVGRMRAKVADDLAADIVRL
LESGVALDTAKPQRDRDLAPTAESGSAATEFVTAQRAGSDGGPRAGFGIEALGGVVADSS
AAPWERSAAVLASGQRSAGPSPRPIGPGDIAVLVRTRSQIDVVRAALDRVGIPSVLAGGT
SVFGTAAATDWLWVLRALEQPHRADRVRLAACTPILGCTAADIDGGGADLVGRISAQLRD
AARLFARAGFAAVFEKLSAETDLARRLLAVENGERELTDLRHIAQLLDQVALTESLGLTA
LTRWLADRVRDPASGAVADRSRRLDRDAAAVQIATVHAAKGLEFPVVYLPFAWDSAKNPY
PQTLLFHDDTGARALDVGGQEAPGYGERKLRSETEEAGEELRLLYVALTRAMCQIVAWWA
PAITTAAAPLHRMILGRPDGGDLVPAKAAVPADNAVVQALSAWAARAPEAVAVAAVDAAA
EVTPRRIRTETPTGELAVARFTRALDHHWRRTSYSALTAGAHDAAVTDAEPEDDRGPSDE
PADPSVLAETDTAATDAAPSLMNALPYGAEFGTLVHGVLELIDTDVADLGTEVHTRCRAA
TEELLAEADPAILGTALLAVLRTPLGFGALADIPNRDRLNELEFELPLAGGDAPAATLRR
IADLLRAHLPTDDDLYEYADLVAHLDDIPLRGYLTGSIDAVLRVAGPDGEQRFIVVDYKT
NRLGTGDLTVAHYTRDRMAAEMLRSHYPLQALLYSVALHRYLRWRLPGYDPARHLGGCRY
LFVRGMIGPETPHGCGVFDWYPPAALVVELSDLLAGDRR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgcgagcacgatctcgcggatcgataccgcggagccgttcgacccgatcggg
tcgctgcccaccgggaccaccgtgctcgaggcgagcgcgggcaccgggaagacgcacgcg
atcgtcgggctcgcggtgcgctatgtggccgaggcgggcgtcgatatcacccagctgctg
ctggtgacgttcagccgggccgcgacccaggaactgcgggagcgcaccagggaccgcttc
gtcgcggtggcggcggcgctggccgatccgctcggggcgcggacgcatccggacgagctg
atccggcatctggcgcaggcggatccggacgaggtgtggcggcggcgggcccgattgctc
accgccctttcggatttcgacgcgggcaccatcgccaccacgcacagcttctgccagcgc
atgctcgacgagctcggcctggccggggagcacgatccgggggcacggctggtcgagacc
atcgacgaactgatcggcacggtggtcgacgatctgtacctcaaccggtatgcccgtgcg
gcacagccattttcgttgaaggaggcacatcagctcggcctggccgcggtgcgcgaccgg
caggcgcggctggtgccggacgagggcggtccggcgggggagcgggtcgcgttcgccgcc
gccgtgcgcgcggaaaccgaacggcgcaaacggctttcggggctgcgcgacttcgacgac
ctgctggtgctgctgcacgaggtgctcgccgatccggcgcacgggccgcgcgcctgccgc
cgcatccgcgaacgctaccgggtggcgctggtggacgaattccaggacaccgacccgttg
cagtgggatatcctgcgccgcgcgttccacgggcacgccaccctggtgctggtcggcgat
ccgaaacaggccatctacgccttccgcggtgctgaggtgctcagctacctggacgccgtc
gcgcacgcggatacgcgcagcgagctgaccaccaactggcgcagcgacgccgggctgctc
gcggccctcgaccatctgcacggcggtgcggccctcggccaccgggacatcctggtacac
ccggtcgccgcgacgcgcccgtggacgcggctgtccggtccggccgagctgatcaccccg
ctgcggctgcgctgtctgccgcgcaaaggcgctgggccgctgaacaaatcgggtttcccc
gcggtcggccggatgcgcgccaaggtcgccgacgacctggccgcggatatcgtgcggctg
ctggaatccggtgtcgcgctggatacggccaagccgcagcgcgatcgcgacctcgcgccg
accgctgaatccggctcggcggcaacggaattcgtgactgcccagcgggcggggtccgat
ggcggaccgcgcgccggattcgggatcgaggcgttgggcggggtcgtcgccgattcctcg
gcggcgccgtgggagcgttcggcggccgtgctggcctcggggcagcgttcggccgggccg
tcgccgcggccgatcgggccgggtgatatcgcggtgctcgtgcgcacgcgttcgcaaatc
gatgtggtgcgagcggctttggatcgcgtcggcattccgtcggtgctcgccggcggcacc
agcgtattcggcaccgcggccgcgaccgattggctgtgggtgctgcgtgcgctggaacag
ccgcatcgggcggatcgggtccggttggccgcgtgcacaccgattctcggctgcaccgcg
gccgatatcgacggcggcggagccgatctggtgggccggatcagcgcccagctgcgcgac
gcggcccggctgttcgcccgcgccggattcgcggcggtcttcgaaaagctctccgccgaa
acggatctcgcgcgacggctgctcgcggtggagaacggcgagcgggagctcaccgacctg
cggcacatcgcccaactgctggatcaggtcgcgctcaccgaatcgctcggcctcaccgcg
ctgacccgctggctggccgaccgggtgcgcgatccggcctccggcgccgtcgccgaccgc
agccgcaggctggaccgcgatgccgccgcggtgcagatcgcgaccgtgcacgccgcgaag
ggtctcgaattcccggtcgtctatttgcctttcgcgtgggacagcgcgaagaacccgtat
ccgcagacgctgctgttccacgacgacaccggcgcccgtgcgctggacgtcggcggtcaa
gaggcccccggctacggcgagcgcaagctgcgcagcgaaaccgaggaggcgggcgaggaa
ctgcggctgctctatgtcgcgctgacccgcgccatgtgccagatcgtcgcgtggtgggcg
cccgccatcaccaccgcggccgcgccgctgcaccgaatgatcctcggccgccccgatggc
ggtgacctggtaccggccaaggccgccgtgcccgcggacaacgctgtggtgcaagcgctt
tcggcctgggcggcccgcgcgccggaggccgtcgcggtggccgcggtggacgcggcggcc
gaggtgacgccgcggcgcatccgcaccgagacgccgacgggtgaactcgccgtcgcgcgg
ttcacccgcgccctggaccaccactggcggcgcacctcgtattcggcgctcaccgcgggc
gcgcacgatgccgcggtcaccgatgccgaacccgaggacgatcgcggtccatcggacgaa
ccagccgatccgtcggtgctcgccgaaacggacacggccgcaacggatgcggcgccatcg
ctgatgaacgcgctgccctacggcgcggaattcggcaccctggtacacggcgtgctggag
ctgatcgacacggacgtggcggatctcggcaccgaggtgcatacccgctgccgcgcggcc
accgaggagctgctcgccgaggccgatccggcgatactcggcaccgcgctgctcgcggtg
ctgcgcaccccgctcggattcggcgccctggccgatatcccgaaccgggatcggttgaac
gaattggaattcgagctgccgctggcgggcggcgacgccccggcggcgaccctgcgccgg
atcgccgacctgctgcgcgctcatctgcccaccgacgacgacctctacgaatacgccgat
ctggttgcccacctggacgatatcccgttgcgcggctacctcaccggcagcatcgacgcg
gtattgcgggtcgcgggtcccgacggcgagcagcgcttcatcgtcgtcgactacaaaacc
aaccgcctcggcaccggcgatctgaccgtcgcgcactacacccgcgaccggatggccgcg
gagatgctgcggtcgcactatccgctccaggcgctgctgtattccgtcgcgctgcaccgt
tatctgcgctggcggctgcccggctacgatccggcccggcacctcggcggctgccgctac
ctcttcgtccggggcatgatcggacccgaaacaccgcacggctgtggcgttttcgattgg
tatccgcccgcggccctcgtcgtcgagctctccgacctgctggccggtgatcggcgatga
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