Nocardia arthritidis: F5544_38255
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Entry
F5544_38255 CDS
T06735
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nah
Nocardia arthritidis
Pathway
nah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F5544_38255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nah03000
]
F5544_38255
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_38255
Enzymes [BR:
nah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
F5544_38255
Transcription factors [BR:
nah03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F5544_38255
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F5544_38255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
UBA_6
Motif
Other DBs
NCBI-ProteinID:
QIS15474
UniProt:
A0A6G9YQI0
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All DBs
Position
8513326..8514840
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AA seq
504 aa
AA seq
DB search
MAITALDFERCYRAVSTRDSRFDGQFFTAVRTTGIYCRPSCPAITPKRANVTFLPTAAAA
QQAGYRACRRCLPDAAPGSPLWNTRADLAARAMRLIGDGVIERGGVPALAAKLGYSQRQL
TRVLTTELGAGPLALARAHRAHTARLLIQTTAMPMSDIAFAAGFASIRQFNDTVREVFAV
SPTTMRTEALRTNGRNPGPVPAPNGSLTLRLPYREPLDRSWLEWFLSSHVVPGVEVWEDH
TYTRNLRTPHGHATARIGFQRDHVRAELALHDMRDLAPTVTRLRHLLDLDADPIGIDEAL
GATGHRPADENRRTAYGFTPGIRVPGCLDGPELLLRTMIGQQISIAAAATHTARLAEALG
ECVDGPAPLLFPTPEAIAERGGEILTGPARRIRSIVGAAEALATGELVLHSGRTATDLRR
DLLALDGVGPWTADYVTMRLLADPDVLLSTDLVVRQGATLLGIDLTDTSRWAPWRSYLSM
HMWKAALNGRANAPKVMAETVTPV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtggctatcacggctttggatttcgagcgctgctaccgggcggtctccacccgggactcg
cgcttcgacggacagttcttcaccgcagtgcggacaactggaatctattgccgcccttcg
tgtccggcgatcacaccgaaacgcgccaacgtcaccttcctacccaccgccgccgcggcg
cagcaggcaggctaccgggcctgccgccgctgcctgcccgatgccgcaccgggttccccg
ctctggaacacccgcgccgatctggcagcgcgcgccatgcggttgatcggcgacggcgtc
atcgaacggggcggcgtgcccgcgctggccgccaaactcggctactcccaacgccagctc
accagggtgctcaccaccgaactcggcgcgggccctttggctttggcgcgggcacaccgg
gcgcacaccgcgcggctgctcatccagaccacggcgatgcccatgtcggatatcgcgttc
gcggcgggtttcgccagcatccggcagttcaacgacaccgtgcgcgaggtgttcgcggtg
agcccgaccaccatgcgcaccgaggcactgcgcaccaacggccgcaaccccgggcccgtg
cccgcgccgaacggctcactgacgcttcgccttccataccgtgagccgctggacaggtcc
tggctggagtggttcctctcctcgcatgtggtgccgggcgtcgaggtctgggaggaccac
acctacaccaggaatctgcgcaccccgcacgggcatgcgacggcgcgcatcggcttccag
cgcgaccatgtgcgcgccgaactcgcactccacgatatgcgggatctggcaccgaccgtg
acgcggctgcggcacctgctggatctcgacgccgacccgatcggcatcgatgaggcgctc
ggcgccaccggacaccggcccgccgacgaaaaccggcgcaccgcatacgggttcaccccc
ggcattcgagtgcccggttgcctggacgggccggagttgttgctgcgcaccatgatcggc
cagcagatctccatcgccgcggcggcgacgcacaccgcgcgcctggccgaggcgctcggc
gaatgcgtcgacggccccgcgccgctgctgttcccgacaccggaggcgatcgccgaacgc
ggcggcgagatcttgaccggcccggcccgccgcatccgctccatcgtcggcgcggccgag
gcgctggccaccggtgagctggtgctgcactccggccgcaccgcaacggatctgcggcgg
gatctgctcgcgctggacggggtcgggccgtggaccgccgactacgtcaccatgcgactg
ctcgccgaccccgatgtgctgctcagcaccgatctcgtggtgcgccaaggggcgacgctg
ctcggcatcgacctcaccgacaccagccgctgggcgccgtggcggtcgtatctctcgatg
cacatgtggaaggcggcgctgaacggacgcgccaacgcgccgaaggtgatggcggagacc
gtaacgcccgtctga
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