Necator americanus (New World hookworm): NECAME_01002
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Entry
NECAME_01002 CDS
T04867
Name
(RefSeq) ARID/BRIGHT DNA binding domain protein
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NECAME_01002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nai03000
]
NECAME_01002
03021 Transcription machinery [BR:
nai03021
]
NECAME_01002
03036 Chromosome and associated proteins [BR:
nai03036
]
NECAME_01002
Transcription factors [BR:
nai03000
]
Eukaryotic type
Helix-turn-helix
ARID
NECAME_01002
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
NECAME_01002
Chromosome and associated proteins [BR:
nai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
NECAME_01002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
25341046
NCBI-ProteinID:
XP_013292281
UniProt:
W2SK66
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MSAVNAEIFIIRMCFENVGGARHKVMMDYAIKLSTTHHLTGILAMQLDQNVPNGGTPFGA
DRYAATAAAVAAGAGSMNHGCVPPKHVQLAGVQQQEWQQPRSPIQQPAGHPPPDGQQIPP
QPIPQQQIPPQLQPHQTQPHPYAGAYPPHFMQGRPPGYPYYPPGYPGLPPGQPGYPGAGA
PVGYPPHMLRPQQQELVRMPQGPTPAEWAAQQQRVMKEANPPTPASIPAPSPAASSVADD
SMDDKSRLESPSWANQGQRTPHPPGSQTPGIAQPPMHPGGPPPPGSMMMHPGMMPPQAMM
PPVMQPTPSSGPRKESIVDKLVGPPTAANPPRVMPERRMFFERLVQFCEQHGEPITMIPQ
ASKVSKQNVDLHRLYIGVRNRGGFEQVTKDKAWKAICTEANPEISQSSAAGYQLRKHYEK
HLLLLECVETGRRPEDAVAFADGLKRQRRKEPAAAAAGATPTSSLPPFPDRLLSLGPVAL
LLLLVPTKEQTAPFSTLNCIYLSVSSIIVITLRNTCVIILVNISLPRRADSFGGGGGGCY
PVAAAFSSSLPSTSFAAGLSSQPSQPPPIGARTAMATATWYPQHPQHGSGYLAASVPQAR
PVTNGPCATASIYPQPGYPPTIASPSSPKISPNTSAYAQYALNYYHQHSLAREREREAYY
RSRSMMPPLLPHQHQPQHQPLDFRPYGPAHGQPQPGQDPSLYYHHQQQQQQAAAHGYPPG
AVPSGPPGAPGAYPTPGYPPRLPPGATPMRAPHPQPHMPPPQQNLVVPAQTPQPATPGRP
GSVQPPTPAALQMDASSQSGSRAPSTGPGASGASPDSSSRMSAGADAADQQRPGSAAVRT
PAATPTPGQHPTPQPSTSMAAVGPPGQPAGVPSHASGAPFYGQPAPMYPNGPARMPGAPA
GYPTSYPYHPGHAGVPPGHPTAPSQQQTPQFASAPHPAAHPAHPQHQQYLQQQQMWHQRG
GYPGPAPGQIPPQAPRYGYAPRMPPPQTTPNQQSAPSPGANKMRYPTQPPQTQPALTQQP
QQQSYPARAPQIAGSYPPVPPQAAPAPTPLVPPVMSFSHQHHFPHGSVEATVISQKRRRK
IMARELINATPRRLIMALRSGLETEAIWAINALNVLLYDDTNPHPCLTQMPGLLNVIIEH
FWATLSVLYPETFPVSRLSEPSCFHIPQGNPEALRLPYLTNGSAHEEVKQPVATRNPENK
RNYNKNSRTGRKVKIMDAEMPELLKRRLMLEEGPSSLPIDETLSVDYVEERIKLGLGGGL
AERVALRLRNEWNAAKIQKRGRFSVHQAKNINSEDCNADTKNKEPVHVKQEPKEQAEEEI
PDILLLRRGRKDEMADGPNEFEIRWPRAIALTDRDETLHRFTLRALALSNILRGFSFLPG
SEHLLCAHSGLLYVLGRFLQLLSTEKPVQRAKPAPKIEVDAPLPEPESYEVARKRALSLL
DCDDCGRVLLVETANQLRDDAFVMLCHMSVALDLFDVPNDLAYPIYDGILHWCASTVPEA
ADPIPPAAVSPRNYSLEIMCKMSVLERNVDMLLSTGAWPRLEKIVRMLAKMLSMSEETHN
REFAIVILNAFCNSSEAVCYVAAMETPTIANLVSFIETSDQSMHQVMQTHGMPALRDNPE
MMGTSVGMLRRAAAMLRLLVKVPEAYRVYAKFQQRLLQFTMSQLMDSRVAGMIADALYEI
QLMLGKENAQNEATDVANGKHNGDASEVVKSEASNDDTSSSASTDVTSENVTNHDSSPAA
INGDASIPAVKKVAMKRSGIRDDCVPKAPASKRTCLENGYEKKNGKLDNSPLKLKETRAE
NGSMTAVA
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgaacgcggaaatatttataatacgcatgtgcttcgaaaatgtaggcgga
gcaagacataaggtgatgatggattacgccatcaaattgtcgacaactcatcatttgacg
ggtattttagccatgcaactggatcaaaacgtgccaaacggtggcacaccgtttggagct
gataggtacgcggccacagccgctgcagtagctgctggagctggttcgatgaaccatggc
tgtgttccaccgaaacatgttcagttagctggagtacaacaacaagagtggcaacaacct
cgatcgccgattcagcagccggcaggccacccacccccagatggtcaacagattcctcca
caaccgattcctcagcagcaaatcccaccgcaactccaacctcatcaaactcaaccacat
ccttatgccggcgcctacccaccgcattttatgcaaggacgaccacctggatatccatac
taccctcctggatacccagggttgcctcctggtcaacctggttacccaggagctggtgcg
ccagtaggttatccgccgcacatgttgcggccgcagcagcaggagctcgttcgaatgccg
cagggacctacacctgcggaatgggccgcacaacagcaacgagtgatgaaggaggccaat
ccacccacccccgctagtattccggcaccaagccctgccgcctcttctgtagctgacgat
tctatggacgacaaatctcgtctggaatcacctagttgggcgaatcaaggacagcgcact
cctcatcctccgggatctcaaacccccgggatagcacaaccacccatgcatcctgggggg
ccaccaccacctggcagcatgatgatgcatccgggaatgatgccaccacaggctatgatg
ccgcctgtaatgcaaccaactccttcttcaggcccaaggaaagagagcatcgttgacaaa
ctggtgggcccacctactgcagcgaatccgccacgggtgatgccagaacggcgaatgttc
ttcgaacggcttgtgcaattctgtgagcaacacggggaacctatcactatgatcccacag
gcaagcaaagtatcgaaacaaaatgtggacttgcaccggctctatattggtgtacggaat
cgtggaggatttgagcaggtcaccaaagacaaagcatggaaagcgatttgcactgaggcg
aatcccgagatctcacagtcgtcagcggctggttatcaactacgcaaacactatgagaag
cacttgctgctgctagaatgtgttgagactggtcgaaggcccgaagatgcggtagcgttc
gctgatggtctgaaaagacagcgacggaaggagcctgctgctgctgctgccggagcgact
ccgactagctctctcccgccattccctgaccgcctcctctctctggggccggtggcgctg
ctgctgttgctcgtgcctacgaaggaacagactgccccgttttcgacgcttaactgtata
tacctttcggtttcatctattattgttattacgcttcgcaacacctgcgtcatcattttg
gtcaacatttcacttccgaggagagccgacagtttcggcggcggtggtggtggctgctac
ccggtagctgctgcattcagcagctcactaccgtcgacgagttttgctgcgggtctctcg
tctcaaccatcacaaccaccaccgataggtgcaaggactgcaatggctacagctacgtgg
tatccgcagcatcctcagcatggaagtggttatctagccgcctcagttccccaggctcgg
ccagtgaccaacggaccatgcgctacggcgtcgatctacccgcaaccgggttacccacct
actattgcctcaccgagctccccaaaaatctcgccgaatacctctgcttatgcacaatat
gcattgaactattaccatcaacacagtcttgctcgggaacgagaaagggaagcgtactat
cggtcacggagtatgatgccgccgttgctaccgcatcagcatcaaccgcaacatcagcca
ctcgatttccgaccatatggtcctgcacacggacaaccgcaacctggccaggatccgtcg
ttgtattaccaccaccagcagcaacaacagcaggcggcagcgcatggatatccacccggt
gccgtaccatcaggacccccaggtgcgcccggtgcgtatccgactccgggatatccgccg
cggttacctccaggtgctacaccgatgcgtgcacctcatccgcagcctcacatgcctcca
ccgcaacaaaatctcgtagttcctgctcaaacacctcaacctgcgacacccggtcgacct
ggttcggtgcaaccaccaacgccggcagctttgcagatggatgcttctagtcagtctggt
agtcgtgctccaagtacaggtcctggtgcaagtggagcctcgccggatagcagctctcga
atgagcgccggtgctgacgctgctgatcaacaacggcctgggtcggctgctgtaaggact
cctgctgcaacaccaactcctggacaacatccaacaccgcagccttcgacgagcatggct
gcggtaggacccccggggcaacctgccggtgttccatctcatgcatccggagctccattt
tatggacaacctgcgccgatgtatcctaatggaccggcaagaatgccaggtgctcctgcc
ggatatcctacaagttatccgtatcatcccgggcatgctggtgttccacccggtcatcca
actgctccatctcaacaacaaaccccacaatttgcgtctgctccgcaccccgcagctcat
cctgctcatcctcaacatcagcagtacttacagcagcaacaaatgtggcatcaacgaggc
ggttatccaggccccgcacccggtcaaattcctccacaagcgcctaggtacggatatgca
cccagaatgcctccaccgcaaaccactcctaaccagcaaagtgcgccatcacctggtgcg
aacaagatgaggtaccctactcaaccaccacaaacacaaccagctctgacccagcaacct
caacaacagtcatacccagcgagagctcctcaaatagctgggtcgtatccgcccgtacca
cctcaagctgctcctgcccctactccgttagtaccgcctgttatgtcattctcgcaccaa
catcattttcctcacggaagcgttgaagcaacagtgataagtcaaaagaggagacgcaag
atcatggctagagagttgataaacgcgacgcctcgacgtctcatcatggcgcttcgcagc
ggcctagaaactgaggcaatatgggcaattaatgctctgaacgtgctcctgtacgacgat
acaaatccacatccatgcttgacacaaatgcctgggctactcaatgttatcattgaacat
ttctgggcgacattatcagtgttgtacccagaaacattccctgtaagtcggctgagtgaa
ccgtcttgcttccatattcctcaaggtaaccctgaagcgttacgcttgccgtatttgacg
aacggaagtgcacacgaggaggtgaaacaaccagtggcgacgaggaatcctgagaataag
agaaattacaataagaattcaagaacgggtagaaaagtaaagatcatggatgcagagatg
ccggaactgctgaaacgaaggcttatgttagaggaggggccgagctcattgcctattgat
gaaacacttagtgtcgattatgtggaagagaggatcaagcttgggcttggaggtggactt
gccgagcgcgtggcgctgcgtctgaggaacgaatggaacgctgcgaaaattcagaaacgt
ggcagattcagtgtgcaccaggcgaagaacataaatagtgaagactgcaatgcagatact
aagaataaggagccggtacatgtgaaacaggagccaaaagagcaagcagaggaggaaatc
ccagatattttgctacttcgtcgtgggcgtaaagatgagatggcggatgggccgaacgaa
tttgaaattcgttggccgcgagcgatagcgctgacggatagagatgaaaccctgcatcga
ttcactcttcgtgccttggctctatcgaatattctacgaggtttctcattcctacccggc
agtgagcacttactatgcgctcatagtggactactgtacgtacttggacgattcttgcag
ttgctatctactgagaagcctgtacagcgtgccaagccagcaccgaaaatagaagttgat
gcaccactgccggagccggagtcgtacgaggtagcgagaaaacgagctctatccttgctg
gactgtgatgattgtggacgagttcttctggttgagacggcaaatcagctaagagatgat
gcttttgtaatgctctgtcatatgagtgtagcgctcgatctcttcgatgtgcctaatgat
ttggcttatccaatctacgacggtatccttcactggtgcgcgtctactgtacctgaggca
gcagatcccattccacctgcggcagtttctccaaggaactactcgttggaaattatgtgc
aagatgtcagttctggaacgaaacgtggatatgctcttatctacaggtgcatggcctagg
ttagaaaagattgtccgtatgctggccaagatgctgagcatgagcgaagagacgcacaat
cgagaatttgccatcgtgattcttaacgcgttctgtaattcatctgaagctgtgtgctac
gtagctgctatggaaacaccaacgatcgcgaatctggtttcgttcattgaaacctcagat
cagagcatgcatcaggttatgcaaacgcatggaatgcccgctttacgtgataatccggag
atgatgggtacatctgtgggaatgcttcgccgagccgcagcgatgctgcgcctactcgtc
aaagtcccggaggcctatcgggtctatgcgaagttccagcaacgtctattgcaatttact
atgagtcagctgatggattcccgtgtagccggcatgattgcggacgcactatatgaaatc
cagttgatgctcggtaaagaaaatgcgcagaatgaggcgacggatgtggccaacggcaag
cataatggagatgcatcagaagtagttaaatctgaagcttcgaacgatgacacctcatca
tctgcttcgacggatgtcacatcagaaaacgtcaccaatcacgactcatctccagcggct
attaacggcgacgcatctattccagctgtgaagaaggtcgcgatgaagagatccggaatt
cgtgacgattgtgttccgaaagctccagcgtcaaagcgaacctgcctggagaacgggtac
gagaagaagaacgggaagctggacaacagcccattgaagctcaaagaaacacgggcagag
aacggatcgatgaccgccgtcgcatag
DBGET
integrated database retrieval system
