Necator americanus (New World hookworm): NECAME_02630
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Entry
NECAME_02630 CDS
T04867
Name
(RefSeq) BSD domain protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03022
Basal transcription factors
nai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECAME_02630
09124 Replication and repair
03420 Nucleotide excision repair
NECAME_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_02630
03400 DNA repair and recombination proteins [BR:
nai03400
]
NECAME_02630
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECAME_02630
DNA repair and recombination proteins [BR:
nai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECAME_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
25342668
NCBI-ProteinID:
XP_013301738
UniProt:
W2TE86
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MLYGRFVGLAACCIDIYLREHVEWRDNAGPEILYVKFMQIKGQRVSPPNKSKVQLQLVLQ
NDDQATFVFLNPALDKEGLTKERDLLKETLQQALIAHRQRVNQLAASNEKDVKQSELKEK
QRLLGENKQLDQLYTHLVASKLITAQEFWTDYYSSSGAVEDKSGISGAFLTNIVQQEGTN
GIKLNLNTEIIQSVFNTYPAGEYIKLEKKHLELVPHEMTEAQFWTKFFQSHYFHREREVL
PNPNDPFADCVRMDEAEIEKIHSDGVHRKRFDLDHLDDNVLKDFVKPEATKGAQKSTLVR
RCNYLSEKILSVLKPSTSTDDTTSEAPKQSGFAVLNRIIDEDEKRLESSELVDQDGKQDC
QSLSIKTDHGGVNRTYSPEEAANYKAIVLTLLESSSDEDILIPEDEEMEVFDVEYGEMNG
TDTEARISGSGDPSEWGLSPAQLNELHAIHDAVAELLKHFWMCFPPVTPELEDKLQRMAQ
TLRSYESNQLREAERRFGRINVEHCYQMLTRAHARFQIYSERKSARH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgctatacggacgatttgtcggtcttgctgcttgttgtattgacatatatcttagggaa
catgtagagtggagagataatgcagggccagagatcctgtacgtgaagtttatgcaaatc
aaaggtcagcgtgtatctcctcctaacaagtcgaaagtgcaattacaattggttctccaa
aatgacgaccaagcaacgtttgtgtttttgaatcctgctttggataaagaaggactgacc
aaggaaagggatctgctcaaagaaactcttcagcaagctcttatcgcacatcgtcagagg
gtgaaccagctggctgcatcgaacgaaaaagatgtcaaacagtcagaattgaaagaaaag
cagcggttattaggggaaaacaagcagctggaccagctttatactcaccttgttgcttcg
aagctcattaccgcccaagaattttggacagactattatagctcttctggtgctgtcgag
gacaaatcgggtataagtggcgcttttctcaccaatattgtgcaacaggagggtacaaat
gggattaaattgaacttaaatactgaaatcatacaatccgtgttcaacacttatcctgct
ggcgagtacatcaaacttgaaaaaaagcatttggagcttgtccctcatgaaatgactgaa
gctcaattctggacgaagtttttccagtcacattattttcaccgtgaaagagaggttctc
cccaatccaaatgacccatttgcggattgtgttaggatggatgaagctgaaattgagaag
atccattctgacggagtgcaccgtaagcgattcgatttggatcatcttgatgacaatgtc
ttgaaggactttgtgaagcccgaggctacgaaaggcgcacagaaaagcactttagtacgt
cgttgtaactacttgtcggagaagatcctgtctgtgctgaagccatcaacgtctacagat
gacacaaccagtgaagctccaaaacaatctggttttgctgttctgaaccgaattattgat
gaagatgagaaaagattggagtcaagtgagctagtggatcaggatggtaaacaagactgt
cagagcttatcaataaaaaccgatcatggaggagtcaatagaacctattcacctgaagaa
gctgcgaattacaaggccatcgtcttgacattgctagaaagttcttctgatgaagacatt
ctcattccggaagatgaagagatggaagtatttgatgtagagtatggcgaaatgaacggt
acagatacagaggctcgaataagtggctctggtgacccgtcggagtggggtttgtcaccc
gctcaacttaacgaattgcacgcaatccatgatgctgttgcggaacttttgaagcacttt
tggatgtgtttcccgccagttactcccgaacttgaagataagctgcaacgaatggctcaa
acccttcgcagttacgagtccaatcaacttcgcgaagcagaacgacggtttggtagaatt
aatgtcgaacattgttatcaaatgctcactcgtgcccatgctcgatttcaaatttactct
gaaaggaaatctgcgcggcactga
DBGET
integrated database retrieval system