Necator americanus (New World hookworm): NECAME_04349
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Entry
NECAME_04349 CDS
T04867
Name
(RefSeq) 3' exoribonuclease family, domain 1
KO
K12589
exosome complex component RRP42
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECAME_04349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nai03019
]
NECAME_04349
Messenger RNA biogenesis [BR:
nai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NECAME_04349
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
NECAME_04349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
25344381
NCBI-ProteinID:
XP_013295578
UniProt:
W2SX02
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MEPILLGAAEKHFIAQGFADGVRNDGRGIDDFRLIWIESPAFTTTNGSARVKIDTTDILV
GVKCEVMECEDTSLTPNRLQFTVEPSCIAALRTEAKGGELLTEAIEAVLMEAYHGNGDVI
TNMEKLVLCKQFMWKVYVDIVIQQYGGNILDAIFIAVKAALLDTRITNLALIPQDEGKFS
IECEESTETNFFRLEAANAPLSISVNQIGKSIAVDCTEVEEVLLRTALWVVMDQPENERT
PDDSIRLRVVKQMFPGGMDPRSIPAMLDLAVRSGRKLHAAVNARLEEIKNADGSQVPGLS
FFDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaacccattttattaggagctgccgagaaacattttatcgctcaaggcttcgccgat
ggagtccgcaacgacggtcgagggattgatgactttcgactgatctggattgagagcccg
gcttttacaacaactaatggttctgcaagagttaaaattgacaccacagatatactggta
ggtgtcaaatgtgaggttatggaatgtgaggacacttctctgactccaaatcgcctacag
ttcaccgtcgaaccctcttgtatagcagcactccgaacagaagctaaaggtggtgaactt
ttgactgaagcaattgaagcagttttaatggaagcatatcatggaaatggtgacgttatc
acgaatatggaaaagctcgtgttatgcaagcagtttatgtggaaagtgtacgtggatatc
gtcatacaacaatatggagggaacattctggatgccattttcattgctgtgaaagctgct
cttctggatacacgcataactaacctagctctgatccctcaagatgaggggaagttcagc
atagagtgcgaagaatctactgaaacaaactttttccgccttgaggcggcaaacgctcct
ttgtcaatttcggttaatcagattggcaagtctatagctgtagattgcacggaagttgaa
gaagtcttgttacgtactgcactatgggttgtgatggaccaacctgagaatgaaaggact
cctgatgattcgatacgcttacgtgttgtgaagcaaatgtttcctggtggaatggatcct
cgctcaataccagctatgctcgacttggctgtacgaagtggtcggaagttacatgctgca
gtaaatgcacgattagaagagattaaaaatgcggatgggtctcaggttcccggtttgtca
ttttttgatgaatga
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