Necator americanus (New World hookworm): NECAME_05461
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Entry
NECAME_05461 CDS
T04867
Name
(RefSeq) SWIRM domain protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NECAME_05461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_05461
03036 Chromosome and associated proteins [BR:
nai03036
]
NECAME_05461
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
NECAME_05461
Chromosome and associated proteins [BR:
nai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
NECAME_05461
PBAF complex
NECAME_05461
GBAF(ncBAF) complex
NECAME_05461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
25345493
NCBI-ProteinID:
XP_013290964
UniProt:
W2SJ18
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MRKGGTKRKRDDDDGDVSMHGDDDDSRSGVAVKVEPPKGREKDPEFSAPKGQKLTDLDDE
SHHGGGKESEGNVIEQTHYIVVPSYASWFDYNAVHQIEKRAVPEFFNGRNKSKTPEVYLS
YRNFMVDTYRLNPFEYLSATACRRNLAGDVCSIVRVHSFLEQWGLINYQVDSDARPAPIA
PPATSHFMVLADTPTGVQPICPVVSNFTQEKKEGEEVEKTPIDKLQNVGLKTDQYQKQLA
AMKTKGAAPGRDWTDQETLLLLEGLEMFKDDWNKVSDHVGSRTQDECILRFLQLPIQDPY
LGSDDANGPGCGDSILGPLAFQPVPFSQSGNPVMSTVAFLASVVDPKVAQAATKAAIEEF
AKIKDEVPALVLEAHARNVQAHEEKTGVLDGTVGLAKSGIATDDKKEEEEGEKMETDETS
KKADDAAVEHRAKVAVSESVQAAAAAALAAAAVKAKHLATIEERRIKSLVAQLVETQMKK
LEMKLRHFDELEQIMDKEREALEYQRQQLILERQAFHMDQLRYLEQRAKHEAHSKMVAAG
QLPASLPPGFEVSGPPQPTPQVQVAIPPTQEASVEKSTEAPAEATAVAARASTPSQPLAV
QQQQPAAPAAAQPPPQSYPPAPPAAQQPGYPPPQAYPPQAYTQQTQPQGAYQGYPPQQGH
PGYPPQQGGAPGYYGQPRPGAYPPQPQPGGYPPQQRPPYQSQPPAGYSAQPQRPGAYPGY
PPQGHPAYPPQQYGQPPAGYPPQPQAAQPPQLDMADAATPPMHQGQPGEVKPQE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaggcggaacgaaacgcaagcgcgatgacgacgatggcgatgtatcgatgcat
ggagatgacgatgacagtcgcagtggcgttgccgtaaaagttgaacctcccaaaggccgc
gagaaagatcctgaattctctgcaccgaaaggtcagaagctaaccgatttggacgacgag
tcgcatcatggtggagggaaggagagcgaaggtaatgtaatcgaacaaacccactacatt
gtggttccttcgtatgcttcctggttcgactacaacgcagtgcatcaaattgaaaagcga
gctgtgccggagttcttcaacggtcgtaacaaaagcaaaacgccggaagtgtatttgtct
tatcgaaatttcatggttgacacatatcgactcaacccctttgaatatctttctgcaaca
gcatgtcgaagaaatctcgctggcgatgtatgctccatcgtcagggtacactcgtttcta
gagcagtggggtctgatcaactaccaggtagactcagacgctcgtcctgctccaattgct
cctccagccaccagtcattttatggttttggcagatacacccactggtgttcaaccaatc
tgtcctgtagtgtcgaatttcactcaggagaagaaggagggagaagaggttgaaaaaacg
cctatagataagctgcaaaatgttgggctcaagactgatcagtaccagaaacaacttgct
gcaatgaagacaaaaggtgcagctccaggacgtgactggaccgatcaagaaacgcttttg
ctacttgaaggattggaaatgttcaaggacgattggaacaaagtttctgatcacgtaggt
tcacgaactcaggatgagtgcatcctacgattcttgcaattgccgatccaagatccttat
ctcggctcagatgatgctaatggaccaggatgtggcgactccattttagggcccttggcc
ttccaacctgttccgttctcgcaatctggaaacccggtgatgtctacggtcgcgttttta
gcttccgttgtggatccaaaggttgctcaagcagccactaaagcagcgattgaggaattc
gcgaaaataaaggatgaggttcccgctcttgtgttggaagcgcatgccagaaacgttcaa
gctcatgaggagaagactggagtacttgatgggaccgtcggacttgctaagtccggaatt
gcaacagacgataagaaagaagaagaggaaggcgagaaaatggaaaccgatgaaacatcg
aagaaggcggacgatgctgcagtggaacatagggcgaaagttgctgttagcgaaagcgtt
caagctgcagcagccgccgccctggctgctgctgctgttaaagccaaacatctggcaact
atcgaggagcggcgaataaaatcgctggtagctcagcttgtcgaaactcagatgaagaaa
ctggaaatgaagttgcgacattttgacgaactagaacagattatggataaggaaagagaa
gctttggagtatcagcgtcaacagttgatactggaaaggcaagccttccacatggaccag
ttgagatatctggaacaacgtgctaaacatgaggcgcatagcaaaatggttgctgcaggc
cagctacctgcatcattaccacctgggttcgaagtaagcggtcctcctcagcctactcca
caggtacaagtcgccattccgccgacacaggaagcgagtgttgaaaagtcgactgaagct
ccagcggaggctactgctgttgcagctagagcttcaacacctagtcaaccccttgcagtc
caacaacagcagcctgcagctcctgcagcagctcaacctcctccacaaagctatcctccc
gctccaccggctgcacaacaaccaggataccctccacctcaagcctatcctcctcaagcc
tacactcaacaaacccaaccccagggtgcgtatcaaggatatcctccacaacaaggacat
ccggggtacccgccgcaacagggtggagccccaggttactacgggcaaccacgtccagga
gcatacccaccacaaccgcaaccaggtggttatccaccacaacagcgtcccccatatcaa
agccaaccacccgcaggatatagcgctcaaccgcagcgccctggcgcttatccaggttac
cctccgcagggacaccctgcctatcccccgcagcagtacggacagccaccggcaggttac
cctccacaaccacaagcagcgcaacccccacagcttgacatggcagatgctgccactcca
cctatgcatcaaggccaacctggtgaagttaagccacaagagtaa
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integrated database retrieval system
