Necator americanus (New World hookworm): NECAME_06632 Help Entry NECAME_06632      CDS       T04867                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism nai  Necator americanus (New World hookworm) Pathway nai03020   RNA polymerase nai03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:nai00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     NECAME_06632   09124 Replication and repair    03420 Nucleotide excision repair     NECAME_06632  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nai03021]     NECAME_06632    03400 DNA repair and recombination proteins [BR:nai03400]     NECAME_06632 Enzymes [BR:nai01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      NECAME_06632 Transcription machinery [BR:nai03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      NECAME_06632 DNA repair and recombination proteins [BR:nai03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       NECAME_06632 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  25346664 NCBI-ProteinID:  XP_013307135 UniProt:  W2TT11 LinkDB All DBs Position Unknown AA seq 1871 aa AA seqDB search MALVGIDFRAPLRQVKRVQFGILGPDEVKRMSVGEIEFPEIYENGKPKKGGLMDPRQGVI DRRGRCMTCAGNLADCPGHFAHLELARPVFHIGFLTKILKVLRCVCFYCSKLLLDKDNQR VKDIIRKTQGNPRRRLALIYDMCKSKIVCDGGNEVENQNPEDGEDGEKVIKASGCGRYQP SYRRTGIDINAEWKKNVNEDTQERKIFLTAERALEIFKQISDEDCLILGMDPRFARPDWM ICTVLPVPPLAVRPAVVTFGSARNQDDLTHKLSDIIKTNIQLRNNEANGAAAHVLADDVK LLQYHVATLVDNCIPGLPTATQKGGRPLKSIKQRLKGKEGRIRGNLMGKRVDFSARTVIT ADPNLPIDTVGVPRTIAQNLTFPEIVTPFNIDKLQELVNRGDSQYPGAKYIIRENGARVD LRYHPRAADLHLQPGYRVERHMRDGDIIVFNRQPTLHKMSMMGHRVKILPWSTFRMNLSV TTPYNADFDGDEMNLHLPQSLETRAEIEEIAMVPRQLITPQANKPVMGIVQDTLCAVRMM TKRDVYIDYPRMMDLLMYLPSWEGKVPQPAIMKPRPLWTGKQLFSLIIPGNVNVLRTHST HPDDEDSGPYKWISPGDTKVLVEHGELISGIVCSRTVGRSAGNLLHVVALELGHEVAAKF YSHIQTVVNAWLLREGHTIGIGDTIADQATYRDIQDTIRKAKLDVIDVIEKAHNDDLEPT PGNTLRQTFENKVNRILNDARDRTGSSAQKSLSEFNNFKSMVVSGSKGSKINISQVIACV GQQNVEGKRIPFGFRHRTLPHFIKDDYGPESKGFVENSYLAGLTPAEFFFHAMGGREGLI DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMIQLRYGEDGLDGMWVENQSMPT MKPTNALFEKDFKNDLSDEKTLRRFYTEDLVRELQASPEATKELEAEFQQLEEDRRLLRK IFPGGDAKIVLPCNLQRLIWNAQKIFHVETRKVSSLSPLHVIDGVKKLSKKLIIVSGEDK ISKQAQYNATLLMNILIRSTLCSKKMASTHKLNMEAFDWLIGEIETRFQQAIAQPGEMVG ALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFLQGAAA KDAEKAKDVLCRLEHTTLKKVVANTAIYYDPDPKNTCIEEDEEWVSIFYEMADFDPSRAS PWVLRLELDRKRMTDKKLSMEHIADKIQQGFGDDLNVIYTDDNADKLVFRLRITNQPSDK GAEVEQVDKMEDDVFLRCIESNMLSDLTLQGIGSISKVYMHKPTTDDKKRVVITPEGGFK AISEWLLETDGTALLRVLSEQHIDPVRTTSNDICEIFEVSLLFMTLKFCFSSSNLYSVKV LGIEAVRKAIEREMNNVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQEVGALM RCSFEETVDILMEAAVHAETDPVKGVSENIMLGQLAKAGTGAFDLVLDAEKCKYGIEVST MMGMYGGVGQFGAAHSPASSSMSPIQTPWNGGMTPGYGAAWSPIGSGMTPGAAGFSPSGH SETGMSPGYSGEGGWSPTSPSDPLGGMSPSGATPRYGGAMSPGYSPTSPNAFGAQSPSYS PTSPHYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSMFICCY ICLLLHSVNSYSPTSPSYSPTSPGYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTY SPTSPSYGGSGYSPSSPRYSPTSPTYSPTSPTYSPTSPQYSPSSPQYSPSSPQYSPSSPR PDASPSYSPSSPQYSPTSPVYTPSSPQANISLQYSPSSPQYSPTSPQYSPSSPNYTPSSP YSPNYDPDSYS NT seq 5616 nt NT seq  +upstreamnt  +downstreamnt atggctctagtgggtatagactttcgggcacctttgagacaagtaaaaagagttcaattt gggattcttggtccagatgaagtaaaacgtatgtcagtaggggagattgagttccccgaa atttatgagaatggaaaacccaagaaaggcggattgatggatccgcgacaaggagtcatt gatagaaggggacgatgcatgacttgtgctggaaatctcgcagattgtccaggacatttt gctcatttggagcttgcgagacctgtgtttcacatcgggtttctaacaaaaattcttaaa gtactccgttgtgtttgtttttattgtagtaaattgcttctggacaaagataaccaacgt gtcaaagatattattagaaagacacaagggaatcctcgtcggaggctcgctttgatatat gacatgtgcaaatctaaaatagtttgtgatggcggaaatgaggtagaaaatcagaaccct gaggatggggaagatggagaaaaagttataaaagcgagcggatgtggtcgatatcagcct tcttatcgtcgcactggcattgatattaatgctgagtggaaaaagaatgtaaatgaagac acacaggaacgaaaaatattccttacagccgaaagagccctggaaatcttcaaacaaatt tctgatgaagactgtcttattctaggaatggatcctcgatttgcacgtcctgactggatg atctgcactgttcttcctgtccctcctctggctgttcggcctgctgtcgttacctttggg tccgctcgaaatcaggacgatttaacgcacaaactctccgatattatcaagacaaatatt cagctgcgcaataatgaagcgaatggggcagcggctcatgtcttggcagacgatgtaaaa ttgttgcagtatcacgtagcaacactcgtagacaactgtataccaggacttccaacggcc acccagaaaggtggaaggccattgaaatccataaagcagcgtttgaaaggaaaggaaggc agaattcgaggaaatcttatgggtaagcgtgtggacttctccgcgcgtaccgttattaca gctgatccaaatcttcctattgataccgttggtgtacctcgcacaatcgctcagaatttg acatttcccgaaatcgtgactccattcaatattgataagctgcaagaacttgtcaatcgt ggagactcccagtacccaggtgcaaagtatattattcgtgagaatggtgctcgtgtcgac cttcgataccatcctcgagcggctgacctccacttgcaacctggctatagagttgagcgt catatgcgcgatggtgatatcattgtcttcaatcgccagccaacactgcacaaaatgtcc atgatgggtcacagagtgaagattctgccatggtctacatttcgcatgaatctgtctgta accactccctataacgctgacttcgatggagatgaaatgaatctgcatctaccccagtca ctggaaactagggcggaaatagaagaaatagcaatggtgccaaggcagctaattactcca caggcaaacaaacctgtgatgggtattgtacaggatacattgtgtgcggtacgaatgatg acaaaacgggatgtttacattgattatccacgtatgatggatcttctcatgtatttaccg tcatgggaaggcaaagtccctcaacctgccatcatgaaaccgagaccgctgtggacagga aaacagcttttttcgctcattatccctggaaatgttaatgtgctgagaactcacagcact catccagacgacgaagatagcgggccgtataaatggatatctcctggcgatacgaaggtg ttggtagaacatggagaactaatttctggtattgtctgctcaaggacagttggtcgatcg gctggtaatcttcttcatgttgttgcacttgagttaggtcatgaagtggccgccaagttc tactcacacattcaaacggttgtgaatgcatggctactgagagaaggtcacacaatcgga ataggtgacactattgccgatcaggctacataccgagacatccaagacacaattagaaag gccaagcttgatgtgattgatgtcattgagaaagctcacaacgacgatcttgaaccaaca cccggtaacactctgcgacagacatttgagaataaagtgaatagaattcttaacgatgct cgtgatagaactggaagttcagctcagaagtcgctttccgaattcaacaatttcaagtct atggtcgtttctggctctaaaggatcaaagatcaacatttcacaggttattgcttgtgtg gggcaacagaacgtcgaaggaaaacgtattccgtttggattccgtcatcgcacgttgcct cacttcataaaagatgactatggaccagaatcgaaaggttttgtggagaactcttacctt gctggtttaacgccggctgaattctttttccacgctatgggaggtcgcgagggtctcatt gatacagctgtgaagacagccgaaactgggtacattcagcgtcgtttgataaaagctatg gagagtgtcatggtcaattacgatggaaccgttcgaaattcgctggcacaaatgattcag ctgagatacggagaagatggtctagacggaatgtgggttgagaatcaaagcatgccaact atgaaacccacaaatgctttgttcgaaaaagattttaagaatgatctctctgatgagaag acgttgcgtagattttacacagaagatctcgttcgagaactacaagcttctcctgaagcc acgaaagaactcgaggctgagttccaacaacttgaggaagatcgccgtttacttcgaaaa atattccctggtggtgatgcaaagattgttctgccttgtaatcttcagcgactgatttgg aacgctcagaaaattttccacgtcgaaacacggaaagtgtcaagtctgagcccactgcac gtcatagatggagtaaagaagttatcgaaaaagctaataatcgtgtctggtgaagataag atttctaagcaggcacagtacaatgccaccttattgatgaatatattaattcgatcaacg ctctgttcgaagaagatggcttcaactcataagctgaatatggaagcattcgactggttg attggtgagatcgaaactcgttttcaacaagccattgctcaaccaggagagatggtcggc gctctagccgctcagtctttgggagaacctgcaactcaaatgacacttaatactttccac tacgctggtgtgtctgcgaagaatgtaactcttggtgtaccacgtctgaaggaaatcatt aatgtgtcgaagcagctgaagacaccgtctcttacggtgtttcttcaaggtgcagcagct aaggatgctgaaaaagcgaaagatgttctatgcagactggaacatacaacgctgaaaaag gttgtagccaatacagccatctactacgatcctgatccaaagaatacatgtatcgaagaa gatgaagaatgggtcagtatcttctacgaaatggctgattttgatccaagtcgtgcgtct ccttgggttttacgattggagctggatagaaagaggatgacagataagaagttgagtatg gaacatattgcggacaaaatacagcaaggattcggcgatgatttgaacgtgatctacact gacgacaatgctgacaaacttgtcttccgtctgcgcatcacgaaccaaccttcggataaa ggcgcagaagtggaacaagtggataaaatggaagatgatgttttcttacgttgtattgaa tcaaatatgctgtcggatttgacattgcaggggattggttcgatctccaaagtatacatg cataagcctacaacagatgacaagaaacgtgtggtcattacaccagaaggaggttttaaa gcaatttctgaatggcttcttgaaactgatggtactgcacttctgagggtattgtcggag caacatattgatcctgtgcgtactacctcgaacgatatttgtgaaattttcgaggtttcc ctattattcatgacgctcaaattctgcttttcttcatctaatctgtactctgttaaggtg ttgggcattgaagctgtccgtaaagcaatcgaacgcgaaatgaacaatgtcatttctttt gacggatcctatgtcaattatcgtcacttggctcttctttgtgacgttatgacggcaaaa ggtcacttaatggccatcactcgtcatggaattaatagacaagaggtcggtgctttgatg cgctgttcattcgaggaaaccgttgacattcttatggaggcagctgttcacgctgagaca gaccctgtgaaaggagtatccgaaaatattatgcttggacaattggctaaagctggtact ggtgccttcgaccttgttttggatgcagaaaaatgtaaatacggcatagaggtttcgacg atgatgggtatgtacggaggagtgggtcaatttggcgccgctcatagtccggcgagctcc tcgatgtctcctattcaaacaccgtggaacggaggaatgactccaggctacggagcagca tggtctcccattggaagtggaatgactccaggagctgctgggttttctccatccggtcac tccgagactgggatgtctccgggttattctggcgaaggaggatggtcaccaacttcaccg agtgatcctcttggaggaatgtctccatcgggagcaactccacgctacggcggcgcaatg tctcccggttattcgcctacgagcccaaatgcatttggcgcccagagtccgagttattca ccaacaagtccgcactattcgccaacgtcgccgtcatactctccaacatcacctagttac agtcctacgagtccaagttactcacccacatctccatcatattccccaacatcgccatct tactcgcctacttcgccgagctacagtcctaccagtcctagtatgtttatttgttgctac atttgtttacttctgcacagtgtaaacagttattcgccaacgtctccatcttattcacca accagccctgggtactcacccagcagtccgcgatattcaccgacctctccgacttatagt ccaaccagccccacgtactctccgacatctccaacgtattcgccgacgtctcctacgtat agtccaacgagtccgagttatggcggcagcggatacagtccatcgagtccacgatactcg ccgacgtctccgacttattcgcctactagtcctacatacagcccaacatcgccacagtat agccccagtagtccgcagtactcgccgtcttctccgcagtactcccccagctctccaagg ccggatgcatcgccttcttattcaccatcatctccacaatatagtccaacatcgccggtg tacaccccgagcagccctcaggcgaatatttctttgcagtactcaccatcatcaccgcag tacagtccaacttctccgcaatacagcccaagctcgcccaattacactccatcttctccg tattctcctaactatgatccagacagctacagctaa

DBGET integrated database retrieval system