Necator americanus (New World hookworm): NECAME_06717
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Entry
NECAME_06717 CDS
T04867
Name
(RefSeq) transcription initiation factor IIF, beta subunit
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECAME_06717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_06717
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
NECAME_06717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
MEA1
Motif
Other DBs
NCBI-GeneID:
25346749
NCBI-ProteinID:
XP_013306980
UniProt:
W2TSP0
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MTPRRDNVDDVEEEDLRAYEVDGWRVGYEVVMNGVGFAEVREDSSDSDDESVDDSGETTE
ASPYPEYRTLPMQIEEPVAGNARTSKDSEEDYSHFENSNLSVSEVISAVDTNATPSITME
FEQCLRDSLSSSEISSHEEIPHMPTNITLDSEKIEAIRSAMSGLSLPPPPHMAPEFKNAR
VNPFSVPFSKNVLHFRVVQLFVHFSLASFSVNMSRKREHAVDCEMAKRGVWLVKVPRYLS
DLWETNAGTDIGRLVIHQGANGKGDVKLKSRPGLVLPQSVSSTVKGPAQIPDEHSFILGD
VLNQTMAVLAEDKTGLNEEAEIKSGRLSLEGRVVKRAECRPPASNSYLKMKIAQISNSGQ
PKKQVLQMEKAAVKFKPVAAHAEDMMRIKQKKEGAKTVRADRNVLMQALFHAFEKHQYYR
LQDLQQLTQQPAGYVKELLTEIAVYNTAPPHKSMWELKPEYRDYAVQK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactccgcgtagagacaacgtcgatgacgtagaggaagaagatctgagagcttatgaa
gtagacggatggagggtcgggtacgaagttgtgatgaacggagtcggcttcgcagaagta
agagaagactcttctgattcggatgatgaatcagttgatgatagtggcgaaacaacagaa
gcatctccttatcctgagtatcgaacgcttccaatgcaaatcgaggaacctgtcgcggga
aatgctcgtaccagcaaagattccgaagaggattactctcattttgaaaattcaaatttg
tcagtgagtgaagtcatatccgccgtggatactaatgcgaccccttcgattacaatggag
tttgagcagtgtttgcgagacagtttatcctcttcggaaatatcttcccatgaagaaatt
ccacatatgccgaccaatataactttggactctgagaagatcgaagcaattcgctcagca
atgtcaggattaagtctcccccctccaccacatatggctccagagtttaaaaatgcaaga
gtaaatcccttctcagtgcctttctcaaagaatgtcctccattttcgggttgtgcagtta
tttgtccattttagtctcgctagtttttctgtgaacatgtctcgaaaacgtgaacatgca
gtggattgtgaaatggccaaacgcggagtatggctcgtaaaagtgccccggtacttatcc
gatctttgggagacaaatgctggtactgatattggacgactagtgatacatcagggtgca
aacggaaaaggagatgtgaagctaaagtcacgtcctggtcttgtattaccacaatcggta
tcatctaccgttaaaggccctgcgcagattcctgatgaacattccttcattctcggtgat
gttctaaatcagacgatggcagttctggcagaagacaagactggtctcaacgaagaagca
gaaatcaagtcgggtcggttatcactcgaagggagggttgtaaaacgtgctgaatgtcga
ccacctgcctcaaatagttatttaaagatgaagattgctcaaatctctaacagtggacaa
cccaaaaagcaggttttgcagatggaaaaggcagctgttaagtttaaacctgttgctgca
catgctgaagacatgatgcgtatcaaacagaaaaaagaaggtgccaagacagtgagagct
gaccgtaacgtactaatgcaagcgctgttccatgcattcgaaaagcatcaatactacaga
ttacaagatttacagcagttgacacagcagcctgctgggtacgtaaaagaattgttgact
gaaatagctgtgtataacactgcaccacctcataaaagcatgtgggagctgaagccagaa
tatcgagattatgctgtacagaagtaa
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