Necator americanus (New World hookworm): NECAME_06761
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Entry
NECAME_06761 CDS
T04867
Name
(RefSeq) 3'-5' exonuclease
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECAME_06761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nai03019
]
NECAME_06761
Messenger RNA biogenesis [BR:
nai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
NECAME_06761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
25346793
NCBI-ProteinID:
XP_013306889
UniProt:
W2TUD3
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MFSEIQAETSFQERVHISNPGIALAKRLREAYEHSKTVKTKVVTVKPQKEYGFESSIDNS
LSPFIPKLRVKHHALRRTESTGIVVVDQGCLNMKEVSTDCYAVGTINPYQYEIQHFVVPE
AQLKSSSPLPVQEMDLTPFTYINTKEGLEKLRDTLNSLKEFAVDLEHHEFRSYLGLTCLV
QISTRTEDYIIDPFPLWNDMHILNEPFTDPSILKVFHGAEHDIEWLQRDFGIYVVNMFDT
GRAMRRLEMQKFNLRYLVHHYCDVSLDKRHQLADWRVRPLDQDMITYARADTHYLLHCYD
HLREELLGKGGRVRTLLPVVYSESALICSKVFSKPMFDKDGFRGLERRRLNSRQFAAMRL
LWCWRDQVAREEDESVHYVLPNRMLVTIAESLPRELQGILQCCNPVPPLVKECLHQLLKM
LFKCRDLPLIEYIDEASDDGNEEIFRNRKLHNEYTKDNVLLTCPLDFSQSEFDEESGNQT
SKAKFSDTKVVVERSTTRSLSSILNYAAVVRRNINEDVGVRTIPDKIEI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagaaatacaagcagagacctcgtttcaagagcgggttcacatctcaaatcca
ggtattgctttagcaaagcgacttcgagaggcctacgagcattcaaaaactgtgaaaact
aaggttgttacagtgaaaccgcagaaagaatacggtttcgagtcatctatagacaactct
cttagtccattcatcccaaaactgcgagtgaaacatcatgctttacgtaggacggaatct
acaggaattgttgttgtggatcagggttgtttgaacatgaaagaagtgtctacggattgc
tatgcagtgggtaccatcaatccgtaccagtacgaaatccagcacttcgtagttccggaa
gcccagctgaaatccagcagtcctttgccagtgcaagaaatggatctgactccgttcacg
tatatcaacacaaaggaagggcttgaaaagctcagggatacactaaatagcctaaaagag
ttcgctgttgacttggaacatcatgagttccggagttaccttggtttaacttgccttgta
cagatttcaacaagaaccgaggactatataattgatccatttcctttgtggaatgatatg
catatacttaatgagccgttcacagaccccagtattttgaaggtattccatggtgcggag
catgacattgaatggttgcaaagagattttggaatatacgtcgtgaacatgtttgacact
ggaagagcgatgcgacgcttggaaatgcaaaagttcaatctgcgatatctcgttcaccat
tactgcgatgtatctttggacaaaagacatcagcttgctgattggagggttcggccactg
gatcaggatatgattacgtatgctcgcgcggacacccattatttgttgcattgttatgat
catcttcgcgaagaattactaggaaaaggtggaagggttcgaactctgctccctgtcgtc
tattcagaaagtgcgctgatttgttcaaaggtgttttctaagcccatgtttgataaagac
ggatttcggggtctggagcgtcgccgactgaatagtcgtcagtttgcagccatgcgcttg
ctctggtgttggcgggatcaggttgctcgagaagaagacgaaagtgtacactatgtactg
cctaatcgaatgttggttaccatcgcagagtccttgcctcgcgagcttcaaggcattctc
cagtgctgcaaccctgttccaccactagtcaaggagtgtctgcatcaactgcttaaaatg
ttattcaaatgtcgcgatcttccattaattgaatatatcgatgaagccagcgatgatggg
aacgaggagatttttcgaaacagaaaattgcataatgagtacaccaaagataacgtactt
ctcacatgtccactggacttttcacagtcagaattcgatgaggaaagtggaaatcaaacc
agtaaagcaaaatttagcgacactaaagttgtcgttgaaagatccacaacgcgttcccta
tcatctattttgaattatgccgctgtggtcagaagaaatatcaacgaggacgtcggtgtg
cgtacgattcccgacaaaattgagatttaa
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