KEGG   Necator americanus (New World hookworm): NECAME_07185
Entry
NECAME_07185      CDS       T04867                                 
Name
(RefSeq) LSM domain protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03018  RNA degradation
nai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECAME_07185
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECAME_07185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nai03019]
    NECAME_07185
   03041 Spliceosome [BR:nai03041]
    NECAME_07185
Messenger RNA biogenesis [BR:nai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECAME_07185
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NECAME_07185
Spliceosome [BR:nai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    NECAME_07185
 Complex C
  U2 snRNP components
    NECAME_07185
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 25347215
NCBI-ProteinID: XP_013306049
UniProt: W2TS47
LinkDB
Position
Unknown
AA seq 96 aa
MLFFSFFKSLVGQDVVVELKNDLSICGTLHSVDQYLNMKLTDISVSEPEKFPQMHAVKNC
FIRGSVVRYVQLPADRVDTQLLQDASRKEAAAQSRK
NT seq 291 nt   +upstreamnt  +downstreamnt
atgttattcttctccttttttaagtcgttggttggtcaagatgtcgtggtggaattgaag
aatgaccttagtatttgtggaacattacattctgttgatcagtacctgaatatgaaatta
accgatatttctgtgtctgagcctgagaagttccctcaaatgcacgccgtgaaaaactgc
tttattcgtggttctgtcgtaaggtatgtccaactgccagctgatagggtcgacacccag
ctgctccaagacgcttctagaaaagaagcagcagctcaaagccggaagtga

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