Necator americanus (New World hookworm): NECAME_07838
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Entry
NECAME_07838 CDS
T04867
Name
(RefSeq) splicing factor, CC1-like family
KO
K13091
RNA-binding protein 23/39
Organism
nai
Necator americanus (New World hookworm)
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nai03041
]
NECAME_07838
Spliceosome [BR:
nai03041
]
Common components
Common spliceosomal components
General mRNP proteins
NECAME_07838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_3
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
25347868
NCBI-ProteinID:
XP_013304954
UniProt:
W2TNZ5
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
IARQTRPRDLEEFFSAVGSVRDVRIITDSRTGRSKGIAYVEFWEEESVPLGLALSGQKLL
GAPLVIQRTCAERNRAANATIGTTLGFGPAPSKGPCKLHVSQLHPNITESMLDGIFDAFG
RVEKIEVVKDPAGNSMGYGFVTFKLTEDATKAMEQLNGFEIAGKPIKVSVVDEDEESIRQ
RSLDDVADEKQGLALGQGGRIQLMAKLAQGTGIELPPSAQQALQQQAADPTIPAIATQCF
MLSNMFDPKTETRPTWAVEVRDDVIEECYKNGGALHVYVDTASPQGNVYVKCPSVASAHK
SVSALHGRWFSGKVITANYVPVTSYHELFPDALVARNVLVPKPSDQQISGGATVPNFAVP
PPPAMSGYGAPPQPGYY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atagctcgccaaactcgtccacgcgatctggaggaattcttcagcgctgttggcagtgtg
cgcgacgtccgcataatcactgactcacgcacaggtcgatctaaaggaatagcttacgtt
gaattttgggaagaagagagcgttcctcttggtcttgcacttagtggacagaaacttcta
ggagctcctcttgtaattcaacgtacatgtgctgaaagaaatcgagcagctaacgccacc
attggcaccacacttggatttggtcctgctccatcaaagggaccttgcaagctacatgta
tcacagttgcatcccaacatcaccgagagcatgctggatgggatttttgacgcttttggt
cgagtggagaaaatagaagttgttaaagaccctgctggcaatagtatgggttacggtttt
gtaacgtttaaactaaccgaagatgcaacaaaagctatggagcagttaaatgggtttgaa
attgccggcaaacctatcaaggtttcggttgtggacgaggatgaggaatcaatacgtcaa
cgaagtttggatgacgtagcagacgagaaacagggccttgcacttggacagggcggacgt
atacaactcatggccaaacttgcccaaggaacagggatagaattgccgccgtctgctcaa
caggctcttcaacagcaggctgctgatcccactatacctgcgattgccacccagtgtttt
atgctttcaaacatgtttgatccaaaaactgaaactcgtcctacttgggcggttgaagta
cgagacgatgttattgaggagtgttataaaaatggcggcgctcttcacgtttatgtagat
acagcaagtccacaaggaaacgtttacgttaaatgtccgtcggttgcaagcgcccacaaa
agtgtttcagcactacacgggaggtggttcagtgggaaagtgataacagcaaattatgta
ccagtgacgtcctaccatgaactcttcccggatgctctagttgctaggaacgtgcttgtt
ccgaaacctagcgatcaacaaatttctggtggtgctacagtgccgaactttgccgttcct
cctcctcctgcaatgtctggatacggagctccacctcaacccggctactattag
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