Necator americanus (New World hookworm): NECAME_08236
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Entry
NECAME_08236 CDS
T04867
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03013
Nucleocytoplasmic transport
nai03015
mRNA surveillance pathway
nai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECAME_08236
09122 Translation
03013 Nucleocytoplasmic transport
NECAME_08236
03015 mRNA surveillance pathway
NECAME_08236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nai03019
]
NECAME_08236
03041 Spliceosome [BR:
nai03041
]
NECAME_08236
03009 Ribosome biogenesis [BR:
nai03009
]
NECAME_08236
03012 Translation factors [BR:
nai03012
]
NECAME_08236
Enzymes [BR:
nai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NECAME_08236
Messenger RNA biogenesis [BR:
nai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NECAME_08236
mRNA cycle factors
Stress granule specific factors
NECAME_08236
Spliceosome [BR:
nai03041
]
Complex C
Other components
EJC/TREX
NECAME_08236
Ribosome biogenesis [BR:
nai03009
]
Eukaryotic type
90S particles
Helicases
NECAME_08236
Translation factors [BR:
nai03012
]
Eukaryotic type
Initiation factors
eIF-4
NECAME_08236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
25348266
NCBI-ProteinID:
XP_013304256
UniProt:
W2TK78
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MSGKKRRNIEPTAEDLSGVEFESSEEVEVIPTFDAMGLREPLLRGIYSYGFEKPSAIQQR
AIKPILKGRDVIAQAQSGTGKTATFSISVLQSIDTDLRECQALILSPTRELAVQIQKVVL
ALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKLLVLD
EADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVDCEEWKFDTLVDLYDTLTITQAVLFCNTRRKVDWLAEKMKEANFTVSSM
HGDMEQKEREQIMKDFRAGNSRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKHDDVRILRDIEQYYSTQIDEMPMNIADMI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaaaaagagaagaaatattgagccaacggcagaagacctgtctggagtggag
ttcgagagttctgaagaagtggaagtaattccaacgttcgatgctatgggattgagagag
ccacttcttcgcggcatatattcgtacggttttgaaaagccatcggctattcaacaacgt
gctatcaagccgattctgaaaggtcgtgacgtcatcgcgcaggctcaatccggtactgga
aaaactgcaacattctcgatttctgttctgcaatcaatcgatacagatctgcgtgaatgt
caagcactgattttgtccccgactcgcgagttggctgtacagatccagaaggttgttctt
gccctcggagactacatgaacgtgcagtgccacgcatgtattggtgggacgaatattgga
gaggatatccgaaaattggactatgggcaacatgttgtatccggaacaccagggcgtgtt
tttgatatgatccgtcgacgcaatctccgcactcgttccataaagttgcttgtccttgat
gaagctgacgaaatgttaaacaaaggattcaaagagcagctgtatgacatctacagatac
ctaccacctggggctcaggtcgtattgctttctgctacgctccctcatgaaatcctcgaa
atgactagcaagtttatgactgatcccataagaattcttgtaaaacgtgatgagctgacg
ctagaaggtattaaacagttcttcgttgccgttgattgtgaggaatggaagttcgacaca
cttgtggacctctacgatactctcaccatcactcaagcagtacttttctgcaatactcgt
agaaaggttgattggttagctgaaaagatgaaggaagcgaacttcacagtctcctccatg
catggtgatatggaacaaaaagaacgtgaacaaatcatgaaggacttccgtgctggaaac
agtcgtgtgctcatttctactgatgtatgggctcgtgggctcgatgttccacaggtttcc
cttgtgatcaattatgatctgccgaacaatcgtgagttgtacatccatcgcattggtcgt
tcaggccgtttcggaagaaagggtgtggcgatcaatttcgtgaaacacgatgatgtgcgc
attcttcgcgatattgagcagtattattcgacccaaattgacgaaatgccgatgaatatc
gccgacatgatttga
DBGET
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