Necator americanus (New World hookworm): NECAME_08440
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Entry
NECAME_08440 CDS
T04867
Name
(RefSeq) Not1 domain, CCR4-Not complex component
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECAME_08440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nai03019
]
NECAME_08440
Messenger RNA biogenesis [BR:
nai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NECAME_08440
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NECAME_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PHM7_cyt
Poty_PP
Motif
Other DBs
NCBI-GeneID:
25348469
NCBI-ProteinID:
XP_013303756
UniProt:
W2TIW2
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAEKRKLLAEIDKCFKKIDEGVELFEETMMKMQEANSDNQREKYQDDLKKEIKKLQRLRD
QVKGWQNCSEIKDKDKLTHYRKLIEQRMEQFKDIERENKTKPHSKQGLSAEEKLDPREKE
KVETIEWLQSQIRELSDEADRTESQIESISSVDAGKRRGKKEDGKKGEKEKRMEELKRHL
DRMKFHMGKLEVCMRMVNNESLESKRVMDVLKDPLEMYVDALVDPDYEGDTDHLENLDPE
DAYEELNLGALSAQIGGIQIGSLDEEKENGHDNGSANEGSGIDEGNSRSGGSRHGSQDTP
ASPAPRRTVAAASVPVTPAKDGSTEAGQVSSLSGVNQATPPPPPPGIPYNSVAAGRITAS
SSLTNTSGPTTSPPANVVNAKTTVIATRPSANSSGGVQLVQLVTSTSTQQNSASIQDDDA
GSTISSQNEIGVQGGATSTADNVVNKADESRTSTVPQPGATKPLATANGTAAENPSLNTP
TETTAQQFAFTNKLYAANEASAALSADGSTASAMADVVEGVQRIPGESGSSRRSGDVGLD
AADDTLRVLRLSQQNQQPVNTEPQRAHIPAWLGASPLGRTQTTSEMEMQLAALEASLART
PLPMDSERPRTYLPKIPCPCASYYPQVSAQNVDTLEYYLRLSPETLFFIFYYMEGTRAQL
LAAKALKKLSWRFHTKYLTWFQRHEEPKQITDDFEQGTYVYFDYEKWSQRKKESFTFEYR
YLEDKDFE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcgcaagctccttgccgagattgataaatgtttcaaaaagattgatgag
ggtgtagagctatttgaggagacgatgatgaagatgcaagaagcgaatagtgataaccaa
cgggaaaaataccaggatgacttgaaaaaagaaattaaaaagttgcagcggttaagagac
caagtgaagggatggcagaactgctctgaaataaaggataaagacaagttaacccattat
cgcaaattgatagaacaacggatggagcagtttaaggacatagagcgggaaaacaagacg
aaaccgcacagcaagcagggcctgagtgcagaagaaaaattagacccacgagagaaagaa
aaggtggaaacgatcgagtggctgcaaagtcaaatccgtgagcttagcgacgaagcagat
cgtacagaatcgcagatcgaatcgatatcatctgtggatgctggaaaaagacgagggaag
aaagaagacggaaagaagggcgaaaaagagaagcgcatggaggagttgaaacgtcacctc
gaccgaatgaaatttcatatgggtaaattggaggtctgcatgcgaatggtgaacaatgag
tctctggagtcgaaacgagtgatggatgtgttgaaagacccattggaaatgtatgtggat
gcgctagtggatccggattatgaaggcgatacggatcatttggaaaatctggatccggaa
gacgcttacgaggagttgaatttgggagcgctgagtgcacaaattggcgggattcaaatc
ggttcgctggatgaagagaaagaaaatggtcatgataacggttctgcaaatgaaggatct
ggcattgatgaagggaattcacgaagcggtggatctcgacacggcagtcaagacactccg
gccagtcctgctccacgtaggacagtcgccgctgcttctgttcccgtcacaccagcaaaa
gacggttccacggaagctggtcaagtgagctcattgagcggagtgaatcaggccacacct
ccgcctcctcctcctggaattccgtacaatagcgtagctgccggacgtataacagcttcg
tcgtccttaacgaacacaagcggtcctacgacatcaccgcctgcgaatgtcgtcaacgcg
aagactacggtaattgcaacgcgaccaagtgcgaatagcagtggaggagttcaactggtt
cagctagtcacatccacttcaacgcaacaaaattcagcgtctattcaagatgacgatgca
ggatcgacgatttcaagccaaaatgagataggggttcagggtggtgccacatcgactgcc
gataacgtggtaaataaagcggatgagtcacgcacatcaacagttccgcaaccgggtgct
accaaaccgttagcaactgccaatggcacagcagctgagaatccatcgttgaacacgcca
acagagacaactgcacagcagttcgcgttcaccaacaaactgtacgcggccaatgaggca
tcggcagctctgagtgcagacggtagcacggcgtctgcaatggcagacgtcgtggaggga
gtacagaggattcctggcgaatctggaagttctcgtcgttccggtgatgtagggcttgac
gctgcggatgatactctacgggtacttcgtttatcgcagcaaaatcaacaaccagtcaac
acagaaccgcaacgagcacacattcctgcttggttgggcgcttctccattaggtcgtaca
caaactacaagtgaaatggaaatgcaactagctgccttggaagcctcacttgcacgaact
cctttgccgatggacagcgaacggccgcgaacgtacttgccgaaaatcccatgtccgtgc
gcttcttactatcctcaggtatcggcacaaaacgttgacactctcgagtattacttgagg
ttgagtccagagacgttgtttttcatcttctactacatggagggtacaagagcgcaatta
ttagcggcaaaggcattgaaaaagttgtcttggcgctttcatacaaagtatctcacatgg
tttcaacggcatgaggaaccgaaacaaataacggacgattttgaacagggcacttatgtg
tacttcgattatgagaagtggtcacaacgaaaaaaggaatcgttcacatttgaatatcgg
taccttgaagacaaggatttcgagtga
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