KEGG   Necator americanus (New World hookworm): NECAME_08448
Entry
NECAME_08448      CDS       T04867                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECAME_08448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nai03041]
    NECAME_08448
Spliceosome [BR:nai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    NECAME_08448
 Complex C
   U5 SnRNP specific factors
    NECAME_08448
SSDB
Motif
Pfam: LplA-B_cat WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_RFWD3 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP BPL_LplA_LipB Beta-prop_Nup120_160 WD40_like Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 25348477
NCBI-ProteinID: XP_013303764
UniProt: W2TKJ6
LinkDB
Position
Unknown
AA seq 622 aa
MGGDDFKVPMLPNRMALVSTENKNEPQRTSKLQLLYVSHYVLFKAPIMLLTGHEEEIFAA
RFSTDGTCLATAGFDQKIFLWNVYGECENFSLLRGHTGAVMDVHFNTDSSLLVSAATDKT
VRVWDMETGACRRKFKSHIDIVNSCHPSRRGPQLICSAGDDGLVKVHDIRLKDAVKTYEN
RFQQLAVTFNDTSDEIFVGSIDSDIYCWDMRRDDISYVMQGHKDIITGLALSPNGNYLLS
NSMDCSAKMWDVRPFAPQERCLKSFYGHQHNFEKNLLKCGWSGDGKRITAGSSDRFVYVW
DVGSRHILYKLPGHLGSVNATDLHPLEPIYEMCEIVRQRICKIYVSLSNCIFKNLAFEEY
LLRNHDLKKDGDAMLLWSNKPAVVIGRHQNPWLEANIPFLHEYGIDLARRHSGGGTVYHD
QGNLNISLLTTRKAHCRKKNLEFLAKVINNRFAVNVVPTNRDDMELQPGSRKCSGTAARI
TTARAYHHLTLLVEADLMVLSASLRSPYKNSINTNASRSVRAAAVGFLKQDDPSVEVDLV
REIVIQRFSEQFEESSVTTVDVDEESKKNEHVAKNLSDLKDWNWIFGKTPKFWFENGNRK
QYVEAGVIKECSLGHVGERFEL
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgggtggagatgactttaaggtgccaatgttgccaaataggatggcgctggtaagcaca
gagaacaaaaatgaaccacagcgaacatcgaaacttcagttattgtatgtatctcattat
gtgctttttaaggctccaatcatgctgctcactggacatgaggaagagatttttgctgca
cgttttagtacagatggaacctgtcttgcaactgcagggttcgatcaaaaaatctttctt
tggaatgtttacggtgaatgtgagaatttttctcttctacgaggtcatacaggagctgtt
atggacgttcatttcaatacagattcaagcttattggtatcagcggcaacagataaaact
gtgcgggtttgggatatggaaactggagcatgtcgacgaaagttcaagtcgcatattgac
atagtaaactcttgtcatccttcacgccgcggaccacaactcatctgttctgctggtgat
gatggcctggtgaaagtgcacgacattcgactaaaagatgctgtaaaaacatatgagaat
aggtttcaacaattggccgtcacatttaatgacacatcggacgaaatctttgtgggcagc
attgacagtgatatttattgctgggatatgcgacgtgatgatatctcttatgtaatgcaa
ggacacaaagacatcattactggattagctttaagtccaaatggcaactacctcctatct
aatagtatggattgctcagcaaaaatgtgggatgtgaggccttttgctccgcaggagcgg
tgtcttaaatccttctatggtcatcagcacaactttgaaaagaatttgctgaaatgtgga
tggtccggtgatggcaagagaatcactgccggttctagcgatcgatttgtttacgtgtgg
gatgtcggctctcgtcatatactttacaaacttcctggtcacttgggttccgttaatgcc
acggacttacatcctttagaaccgatatacgaaatgtgtgaaatagttcgtcaacggata
tgtaaaatatacgtttcgctttcaaattgtatcttcaaaaacttagcgtttgaagaatat
cttcttagaaatcatgatttgaaaaaagacggagatgcaatgctgctttggagcaataag
cctgccgttgtcatagggcgacatcaaaatccatggctggaagcaaatattcccttttta
catgaatatgggatcgacttagcacgacgtcacagtggtggtggaactgtataccacgac
caaggaaatctgaacatatcactgcttacaacacgaaaggctcactgtagaaagaagaat
ctagagtttctagctaaagtgatcaataaccgctttgcagtgaacgttgttcccaccaat
cgggatgatatggagcttcaaccgggttcacgaaagtgctcaggaacagctgctcggata
accaccgcacgagcttatcatcatctcactttacttgttgaagctgatctcatggttcta
tccgcttcactgcgatctccttataagaattctataaacaccaatgccagccgaagtgta
cgagctgcagctgttggtttcctgaaacaagatgatccgtctgtagaagtcgatttagtg
cgagaaattgtgatacagcggttttctgagcaatttgaagaaagttccgtcactacagtc
gatgttgatgaagagtcgaagaaaaatgagcatgttgccaagaatttatccgatctcaaa
gactggaattggatttttggaaaaactcctaaattctggtttgaaaacggcaacaggaag
cagtacgttgaagcgggtgttataaaggagtgttcgttaggacatgtaggagaacgattc
gaactctaa

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