Necator americanus (New World hookworm): NECAME_09309
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Entry
NECAME_09309 CDS
T04867
Name
(RefSeq) replication factor RFC1 domain protein
KO
K10754
replication factor C subunit 1
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03030
DNA replication
nai03410
Base excision repair
nai03420
Nucleotide excision repair
nai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NECAME_09309
03410 Base excision repair
NECAME_09309
03420 Nucleotide excision repair
NECAME_09309
03430 Mismatch repair
NECAME_09309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nai03032
]
NECAME_09309
03400 DNA repair and recombination proteins [BR:
nai03400
]
NECAME_09309
DNA replication proteins [BR:
nai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NECAME_09309
DNA repair and recombination proteins [BR:
nai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NECAME_09309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
AAA_30
RuvB_N
nSTAND3
AAA_16
AAA_14
NTPase_1
AAA_5
Zeta_toxin
CENP-T_C
AAA_19
AAA_18
AAA_17
AAA_assoc_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
25349338
NCBI-ProteinID:
XP_013302441
UniProt:
W2TF39
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MDPKQFSPQTCRYSSTWRLLSALDVSDIRSFFGGKKGGTQEEKAGTGSSHPAAKGGPSTS
HSEPTKRSHKIETNASVKKAKSSKKPSIPVVDLGDDDDSEGESPIPSSLCKPESELKRRR
RAVVSDSDDDLPLPKSSKTRVKSITPSPVKSPPKNKRSRLVVYDSDEGQSPLKKQNKIER
TPKAIQSSSDDDEMSETDSENEFVERKKTKKKDVLPAGQKKLNFEGGAKKTAPAKGGIKS
TEKLQRVTAADFFGGSGVGGGTLSSSKNKEIPKDSKVSPSQKENAPGKLGKPIKVEKELE
SSGGRGVSPKQRSDSKAGENKRKPEKKQEERKMSSQKADLKKGKAKSPLQDRGKPKTSNA
AIVEVPELLKADACVPWVDKYKPKTNSQLVGQHGDKSPYNKLFSWLKDWGRNNLGEGGKI
KKAKPPPFLAQTDGAPFKAVLLSGSPGVGKTTCAAMACESLGLKIVEMNASDVRNKKSLE
QQITQLTESHQIEEYFTSLPGRTGSEEEVKHALIMDEVDGMSGTEDRAGIAELIQIIKDT
KIPIICICNDRQHPKIRSLANHCFDLRFQKPRVEQIRARLMSIACQEKVKISKEELDQMI
ELSGHDVRQSIYNLQMYASAGGQTKVQKKDIAVGPFEAARKLLDSRSTLQEKQDMFFVDY
GIMPLFVQENYPNMRNDKHTPKQAIAGLRKAADLISLGDTIERCIRSTGTWKLLNEQVSR
RSLASCAWLSGSRESDLSLFQAMIGCALPSIAVDGHLRAMIQFPAWLGKNSTANKRQRLM
RQLAIHAHLKISADMHSLVADYVPVLRDCLTKPLLERETDGV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaagcaattcagcccacagacttgccgatactcatcgacctggaggttattg
tcagcattggatgtgtctgatatacgaagtttctttggtgggaaaaagggtggcacacag
gaggagaaggcagggacgggctcatcgcatccagctgcgaaaggtggtcccagcacttca
cattcagaacccacgaaaagatcgcacaaaatcgaaacaaacgcatcggtgaagaaagca
aaatcttcgaagaaaccaagtattcctgttgtggacctgggcgacgacgatgattcggaa
ggtgaatctccgataccttcctctttgtgcaaaccagaaagcgagctgaagcgacgtcga
cgggcggtggtttctgattccgacgatgatttgcctcttcccaaatcatctaaaactcgt
gtgaagtcaataacgccatcacctgtgaagtcccctccgaagaataagaggtcacgattg
gttgtctatgacagcgatgaaggccagtcaccgctgaagaaacagaacaaaattgaaaga
actccaaaggcgatccaaagctccagcgatgatgatgaaatgagcgagacagacagtgag
aatgagtttgtcgaaagaaagaaaacgaagaaaaaagatgtgctgccagctggtcaaaag
aagctcaatttcgaaggtggagcgaagaaaactgctccagcaaaaggagggataaagtcc
acggaaaagcttcagcgagtaactgctgcagatttttttggaggcagtggtgttggtggc
ggaacattgtcttcttctaaaaataaagagattccgaaagactcgaaagtgagcccatct
cagaaagaaaatgctcctggaaagcttggaaagccgataaaggtggaaaaggaactcgaa
agtagcggaggacgaggagtttctcctaaacaaagaagtgatagcaaagcaggcgaaaac
aagcgaaagcctgagaagaaacaagaagaacgcaaaatgtcttctcagaaggctgatctt
aaaaaaggtaaagccaagtcgccgttgcaagatcgtggcaaaccaaaaacgtctaatgct
gctatcgtcgaagttcccgaattgttaaaggctgacgcgtgtgttccctgggtggacaaa
tataagccaaaaaccaactctcagctcgttggtcagcatggcgacaagagtccttacaac
aagctttttagttggttgaaagactggggacggaacaatcttggtgaaggaggaaaaata
aagaaagccaaaccaccgccattcttagctcagacagacggtgcccctttcaaggcagtt
ttactctctggatcaccaggtgttggcaaaactacgtgtgccgcaatggcatgcgagagc
cttggtttaaagattgtggagatgaacgcatcagacgtgcgcaacaagaaatctttagag
cagcagatcacccagctcacagaatcacatcagattgaggaatatttcacatcgctgcca
ggcagaacaggctccgaggaagaggtcaaacacgccttgataatggatgaggtcgacgga
atgagtggaactgaagatcgcgcagggatagccgaactcatccagataatcaaagacacg
aaaattcctatcatttgtatctgcaatgatcgtcaacatccgaagatccgtagtttggct
aatcactgctttgatttgcgcttccaaaagcctcgtgtcgagcagatcagggcacgcctt
atgtctatagcatgtcaggagaaggtgaagatttcgaaggaagaacttgaccaaatgatt
gaattgtcagggcatgacgtgagacagtcaatctacaatctgcaaatgtacgcttccgca
ggtggacaaactaaggtgcagaagaaggacatagcagttggtccgtttgaagccgcccgg
aagcttctcgactcaaggtccactttgcaagagaaacaggacatgttctttgtggattat
ggaataatgcctttattcgttcaagagaactatccgaacatgcgaaacgacaaacataca
cctaaacaagccatagccggtcttcgaaaagctgctgatttgatctctcttggagataca
attgaacgatgtataaggtcgaccggaacatggaagttgttaaatgagcaggtcagcaga
agaagcttagcctcgtgtgcctggcttagtggaagtcgagaaagtgatctttccctgttc
caggcaatgattgggtgtgcattaccgtctattgccgttgatggtcatcttagagcaatg
attcaattccctgcttggctgggcaagaattcaacagcgaacaaaaggcaacggctaatg
cgtcaactagcgattcacgcccaccttaaaatatctgctgacatgcactcgttagttgcc
gactacgtgccagttttaagggactgtctcacaaagccgctcctcgagcgagaaaccgac
ggagtttag
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