Necator americanus (New World hookworm): NECAME_09923
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Entry
NECAME_09923 CDS
T04867
Name
(RefSeq) splicing factor 3B subunit 3 family protein
KO
K12830
splicing factor 3B subunit 3
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NECAME_09923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_09923
03041 Spliceosome [BR:
nai03041
]
NECAME_09923
03036 Chromosome and associated proteins [BR:
nai03036
]
NECAME_09923
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
NECAME_09923
Spliceosome [BR:
nai03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
NECAME_09923
Complex B
NECAME_09923
Complex C
U2 SnRNP specific factors
NECAME_09923
Chromosome and associated proteins [BR:
nai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
NECAME_09923
TFTC complex
NECAME_09923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Motif
Other DBs
NCBI-GeneID:
25349952
NCBI-ProteinID:
XP_013301432
UniProt:
W2TAY9
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MHLYNLTLQGQTAINQAVHGNFSGTPKAQEICVGRGSTLQLLFCDPTTGKIKVLCSHEVF
GIVRSLMPFRLTGGTKDYIAIGSDSGRIVILEYSTEKNSFVRVHQETFGKTGCRRIVPGH
YLAVDPKGRAIMIGAVERQKLVYIMNRDAEARLTISSPLEAHKQYTLCYGMVGIDVGFEN
PTFACLEYDYEDAEHDPTGEALQTTKQTLTFYELDLGLNHVVRKYAEPLDDKATMIIAVP
GGNEGPSGVILCCENYLIYKNLGEQPDIRCPIPRRRNDLDDPDRSLMIICAATHKTKLMY
FFLLQTEQGDLFKVTLETDEDLVTEMKVKYFDTVPAANAMCILKTGFLFVASEFGDHHLY
QIANLGDDPEEPEFSSKMHLDEGETFFYGIRELKSLVPIDRIESLCPLTDAYIGDLARED
APQIYALVGRGARSTLRVLRNGLEVSEMAVSELPGNPNAVWTVKKNIDDKHDAYIVVSFV
NATLVLAIGETVEEANDSGFMATTPTLGCGIIGDDALLQIYPEGIRHIRSDRRVNEWKTP
GKRQIVKCAMNRRQVAVALAGGELVYFELDPTGQLNEFTERTSWPHEVLCMSLSEIPEGE
LRSRFLTVGIADSTVRVISLDPQDTLSPLSMQALPSPPESLLLLETTSEDGKGQSTIHLN
IGLQNGCLLRTTVDNVTGDMMDTRTRYLGTRPVRVFRVRSQNKDAVLCTSSRSWLLYHYQ
NRFHLTPLSYVTLESASSFSSEQCLEGIVAIAENTLRIMAVEKLGASFNHITYPLKFTPR
RMIVHPLATSIMIIETDHAAYTTITLDKKRNDMADDIVRLATDMEEVELAKEIADVLRNN
RPDETVYGAAKAATGKWASVVRLLNVKSGEVLSLFELPQDEAAKCIALVQFASHQDTLMV
LVGCTIAQKLSQVAKSTRGCIYTFLLTAAGDRFELIHRTDTPYPVNAIHDFRGSALVGMS
NHLRLYEFGKKKLLAKCENKVEHLSKQ
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtacaatcttactctccaagggcaaacggctattaatcaagcagttcacggg
aatttctcgggaacaccgaaagcacaggaaatttgtgtgggacgtggttcaacgttgcaa
ttactcttctgtgacccaactacaggaaaaatcaaggtcctgtgcagtcatgaagtattt
ggaattgtacggtccttgatgccgtttcgtctaactggaggcacaaaagattatattgcc
attggatctgactcagggcgtattgttatattggaatactctaccgaaaagaactctttc
gttcgagttcatcaggaaacatttgggaagactggatgccgccgaatcgtccccgggcat
tatttagcagttgatccgaaagggcgagcaatcatgatcggagctgtcgaacgtcagaag
ttagtgtacatcatgaatcgtgatgcggaagcgcgtttgacaatttcttctcctctggag
gctcacaagcaatacacgctttgctatggcatggtcggaatcgatgtcggatttgaaaat
ccaacctttgcttgccttgaatatgattatgaggatgcagaacacgacccaactggggaa
gcactacagacgaccaaacagacgctgactttctacgagcttgatctgggtcttaatcac
gtagtcagaaagtatgctgagcctctggacgacaaagctacgatgattattgcagttcct
ggagggaatgaagggccatctggggttattctttgttgcgagaactatttgatatataaa
aacttgggagagcaaccagacattagatgtcccattccgcgacgcaggaatgatctcgat
gatcctgatcgttcacttatgatcatatgtgccgctacacataagacaaaacttatgtat
ttcttccttctgcagaccgaacaaggagatcttttcaaggttaccttggaaaccgacgaa
gatttggtgacagagatgaaggtcaaatatttcgatactgtaccggctgcgaacgctatg
tgcatcctcaaaaccggatttttatttgtcgctagtgaatttggagatcatcatctctat
caaatcgccaatttgggagatgatccggaagagcccgagttctcttcaaagatgcatttg
gacgaaggcgagaccttcttctatggcattcgtgagttgaaaagtttggtccctatcgac
cgtatcgaaagtctgtgcccgttgacggatgcatatataggagatttggcacgtgaggat
gcacctcaaatatatgcgttagtgggtcgtggtgcacgatctactcttcgggttctcagg
aatggtctagaggtgtcggaaatggccgtatctgaacttcctggtaacccgaatgcggta
tggactgtgaaaaagaacatagatgataagcacgatgcatacattgttgtatctttcgta
aatgcaacacttgtgttggcgattggtgaaactgtcgaagaggcgaatgactctggtttc
atggccacaactcctacgcttggttgtggaatcattggtgacgatgcattacttcaaatt
tacccggagggtattcggcatatccgttcggatcgtcgtgtgaatgaatggaagacccca
ggaaaacgacagattgtgaagtgtgcgatgaaccgacgacaagttgctgttgctttagct
ggtggtgaactcgtgtatttcgagcttgatcccactggtcagctgaatgagttcactgag
cggacttcatggccacatgaggtattgtgtatgagtttaagtgaaattcctgaaggagaa
cttcgttcacgcttcctcactgttggaattgccgacagtactgtacgagtgatttcgctg
gatccccaggacaccctcagtcctctaagtatgcaagctcttccatctccaccggagtcg
ctccttcttcttgaaacaaccagtgaagatggtaaaggacaatcgactatccatcttaac
atcggtcttcagaacggatgtcttttgcgaacgactgttgataatgttactggagatatg
atggacactaggacaagatatctgggaaccaggccagtgagggtgttccgcgtgcgcagc
caaaacaaggatgctgttctctgcacttcttcgcgatcttggctcttgtaccactatcaa
aatcgtttccatctcactccactcagttacgtaacattggagtcggcttcaagtttcagc
tcagaacaatgtctggaaggaatcgtcgcaattgctgaaaatactttgaggatcatggca
gtagaaaagcttggcgcatcattcaatcatatcacctatcctctgaagttcacacctcga
cgaatgatcgttcacccattagcgacttcaattatgatcattgaaactgaccatgcagcg
tacacgacaattactctggacaaaaaacgaaacgatatggccgatgatattgttcgtctt
gctactgatatggaagaagtagaattagctaaagaaattgccgatgttcttcgaaataat
agaccagatgagaccgtgtacggagcagccaaggctgctacaggaaaatgggcgtccgtt
gtacgtcttctgaatgtgaaaagcggcgaggttctatcactcttcgaacttcctcaggat
gaagctgcgaaatgcatcgctcttgtgcaattcgcaagtcatcaagataccttgatggtc
cttgtaggttgcactattgctcaaaaattgagtcaggttgctaaaagtacccgtggttgc
atttacacgttccttctgacagctgcaggagaccgttttgaacttattcatcgcacagat
acgccataccctgtcaacgcgatccatgattttcgcggttcagctcttgtgggaatgtct
aatcatctgcgcctctatgaattcgggaagaaaaagttacttgccaaatgcgagaataaa
gtggaacatctgagcaaacaatag
DBGET
integrated database retrieval system
