KEGG   Necator americanus (New World hookworm): NECAME_10280
Entry
NECAME_10280      CDS       T04867                                 
Name
(RefSeq) RNA polymerase Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03020  RNA polymerase
nai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NECAME_10280
  09124 Replication and repair
   03420 Nucleotide excision repair
    NECAME_10280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nai03021]
    NECAME_10280
   03400 DNA repair and recombination proteins [BR:nai03400]
    NECAME_10280
Transcription machinery [BR:nai03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     NECAME_10280
DNA repair and recombination proteins [BR:nai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NECAME_10280
SSDB
Motif
Pfam: RNA_pol_Rpb4 Hpt TetR_C_36
Other DBs
NCBI-GeneID: 25350309
NCBI-ProteinID: XP_013300773
UniProt: W2TBH3
LinkDB
Position
Unknown
AA seq 142 aa
MSSAVKQNEDTVDEDATEMRFPKEFESQNCDALLTSEVFLLLEHRRQQNEAKDEIEDMSE
VFIKTLNYARRLSRFKNRETIKAVRAIFSQKPLHKFEVAQIVNLCPETAEEAKALIPSLE
NKLEDDDLDEILRDLHSKKTFQ
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcttcggcagtgaagcagaatgaggatactgttgatgaggatgcaacggaaatgcgt
tttcccaaggagtttgagtcgcaaaactgtgacgctctcctgacgtcggaggtattcctg
ttactagagcaccggcgacaacaaaatgaagcgaaagatgaaattgaagatatgagcgag
gtattcatcaagacgctcaactatgcacgacgtttgtcgcggtttaaaaaccgcgaaaca
ataaaagctgttcgagctatattctctcagaaacctttgcacaaatttgaagttgcgcaa
attgttaacctctgtcctgaaaccgctgaagaagctaaggcgctaattccatcgcttgaa
aataaactggaggacgacgacttggatgaaattctgagagatttgcacagcaagaaaacg
tttcaatga

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