Necator americanus (New World hookworm): NECAME_13404 Help Entry NECAME_13404      CDS       T04867                                  Name (RefSeq) hypothetical protein   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism nai  Necator americanus (New World hookworm) Brite KEGG Orthology (KO) [BR:nai00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:nai03016]     NECAME_13404 Enzymes [BR:nai01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      NECAME_13404 Transfer RNA biogenesis [BR:nai03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     NECAME_13404  Prokaryotic type    tRNA splicing ligases     NECAME_13404 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-GeneID:  25353432 NCBI-ProteinID:  XP_013296027 UniProt:  W2SW17 LinkDB All DBs Position Unknown AA seq 504 aa AA seqDB search MPRTFEEECAFIERVSECKFKIRKGFVPNMNVECRFYVNKRLEEQMFDELRNSIGRGVGG FLPAVRQLGNVAALPGIVGYSIGLPDIHSGYGFSIGNIAAFDCSKKESVISPGGVGFDIN CGVRLIRTNLFEKDVAPVKEQLTQALFDYIPVGVGSRGAIPMSASDLVDCLEMGMDWTLR EGYSWAEDKEHCEEYGRMLQADSTKVSTRAKKRGLPQLGTLGAGNHYAEVQVVDEIFDKH AAAKMGIGELGQVVVMLHCGSRGLGHQVATDALVEMEKAMARDGIVVNDRQLACARIYSS EGQDYLKGMAAAANFAWVNRSCMTFCVRQAFANTFNMQPDDLDMQMIYDTSHNVAKMEEH LVDGRPTQLCVHRKGATRAFPPHHPLIPVDYQLTGQPVLIGGSMGTCSYVLTGTDRGMVE AYGTTCHGAGRALSRSKSRQKIPWSEVIENLKKKGISIRLASPKLIMEEAPESYKDVTDV VNTCDTAGISEKSVKLRPIAVIKG NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgcctcggacttttgaggaagagtgcgcttttatcgaacgtgtttcagaatgcaagttc aagattaggaaaggttttgtgccaaatatgaatgttgagtgtaggttttatgtgaacaaa aggcttgaggagcaaatgtttgatgaactacgtaattcaataggaagaggggttggagga ttcttgcctgctgtgcgacaactgggcaacgtcgctgctcttcctggaatagtaggatac tcgattggtcttccggatatccattcaggatatggattttcgataggaaatattgctgct ttcgattgttccaaaaaagaatccgtcatctcaccgggaggtgtaggattcgacataaat tgtggagtacgactaatcagaacgaatctgttcgagaaagacgtagcacctgtcaaggag caattaacacaagcgctttttgactatattcctgttggagtaggttcacgaggcgccatc ccgatgtcagcctccgatcttgtcgactgtctagaaatgggcatggattggactcttcgg gaaggttactcttgggctgaagacaaagaacactgcgaagagtatggtcggatgttgcaa gcagactctacgaaggtttcaactagagccaagaaacgaggactaccacagttaggtact ttgggcgcaggaaaccattatgcagaggtacaagttgtagatgagatcttcgacaaacac gcagcagcgaaaatgggcattggcgagctagggcaggttgttgtaatgttgcattgtggt agtcgtggattaggtcatcaagtagctactgatgccttagtggaaatggagaaggcaatg gctcgcgacggcatagtggtgaacgacagacagttggcttgtgctagaatttattctagt gaaggacaagattatctaaagggaatggcagcagcagcgaattttgcttgggtaaaccga tcctgtatgaccttctgtgtacgacaagcgttcgctaacacattcaacatgcaacctgat gatttagacatgcagatgatctacgatacatcccacaacgttgcaaaaatggaggaacat ctcgtggatggtcgaccaactcaactctgcgttcaccgaaaaggagcaacgcgtgccttt ccaccacatcatcctcttattcccgttgactatcaactaacaggacaaccagtactgatt ggtggaagtatgggtacttgcagttacgtgttgaccggtacagatcggggtatggtggag gcatatgggacgacatgtcatggagcaggacgagccttgtctcgatcaaaatctcgccaa aagattccttggagtgaagtcattgaaaatttaaaaaagaagggtatctcaattcgtctg gcttcgccaaagctcatcatggaagaggcaccggaatcctacaaggatgtaactgatgtc gtcaatacatgtgacaccgcgggcatcagtgaaaagtccgtgaaattgcgaccaatcgca gtaattaaaggttga

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