KEGG   Necator americanus (New World hookworm): NECAME_14091
Entry
NECAME_14091      CDS       T04867                                 
Name
(RefSeq) Utp13 specific WD40 associated domain protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NECAME_14091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nai03009]
    NECAME_14091
Ribosome biogenesis [BR:nai03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    NECAME_14091
SSDB
Motif
Pfam: KH_PNO1_2nd WD40_WDHD1_1st Utp13 WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML ANAPC4_WD40 UTP15_C Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP RMC1_N Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C KH_KRR1_2nd KH_1
Other DBs
NCBI-GeneID: 25354118
NCBI-ProteinID: XP_013294016
UniProt: W2SQ12
LinkDB
Position
Unknown
AA seq 1025 aa
MWLKLSNLTKIFVGQSSFCTILTTTTNEILLLLLFFSYTIGDTEESLRITSICLDKNGSR
LFVAYTNYTVREFTLGESSSNVARTWKTMHTAPILSMKFSIDGSLLATGSADHTVKIWDI
PQQHCTHTLKGSGVVSALTFVQNSRLMKESPYLIIVSLNKSRILLLLKEAHSRTFVVIGK
EPANHFNQVTGFVELPGFRRVVAVSRDRTASVIEIETREVLKVFPLFEAVESVILAHNGN
IVTVGEEGTVKEWVISSGSVVRRKKITEVGLDFLVYNPVRDQLLMASAEENIFVVSFDDL
SLKRQIVGFHDEVYACSLLGKNDSHLAVASNAKEVRLYDVETWDCQMIDGHSDSVLHVTT
APFNRRLLASCSKDNCIIIWRLTVKTQLFVYPRSSWEGCELCRCCAHRQHLYKMDKMVKL
WHIDSGKMRLGIAGTLSGHRRGVADARFSPNSLILFVNHGTQLVSGDSAGIVKIWTLATS
ETEASIEAHNDKAYIFVYLLIWALLPNHDESEYISAGTDGRIVIWKDVSEEKKLEQEAKL
RRRMEEEQTLTNFLEQGRSQEALRFALGLVRPFCALKVIDQLIDRDELASAVMKLDKQQI
QTLLDFAAQWNTNSRTSLASQNVLNCILKIIPPDELLDFSNIRSVVESFIPYTKRKSIVK
ILVVQTYGTVKQSSSGCVATNFHLESNASQLIFVDVPKFCFVWSFIDKSISPVLVVANGS
LISLCFARKMGDDLPMEDIDDMPELIDVDVPAQLPSLIEQNIVKPKEVEEFLQVRVSDIP
PRAKEVGVLQAAPLSQEVSKRKRKSNTKDVEMEECGSTVAGNGEGDGMEASSRRAKKSKG
EKGEMRKIPVPKHRYTPLKDNWVNIFTPVVKNLGLQIRFTKSIEFSSGIQFSIFCAFCTL
VHIWAADFVRAFILGFDVADALALIRLDHLFLETFEVADVKSSLKGDNLSRAVGRIAGKD
GRTKLVIENVTKTRIVLADTKIHLLGAFQNLKLARNAISSLILGAPPSKVYGNLRNLASR
SSERL
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgtggttaaagctatcaaacttgacgaaaatcttcgtaggccagtcttcgttctgtacc
atcttgactaccacaaccaatgaaattttactattgcttcttttcttcagctacaccatt
ggtgacacagaggagtcccttcgcatcacatctatttgtttggataaaaatggctctcga
ctttttgtagcctatactaactatacagtgcgtgaattcacacttggtgagtcctctagt
aatgtcgcgcgaacatggaagacgatgcacacagctccaatcctttccatgaagttcagt
attgatgggtcactgttagcaactgggtcagcagatcacacggtcaagatttgggatatt
ccccagcaacattgcactcatacactgaaaggatctggagtagtttctgcgctgactttc
gtgcagaacagtcggctcatgaaggagagcccctatctcataattgtgtctttgaataaa
agtagaatcctccttctgctcaaagaagcacattcacgcacttttgtcgtcattggaaaa
gaacctgccaatcatttcaatcaggttactgggtttgtcgaactacctggatttcgtcgc
gttgtcgccgtttctagagatcggacagcatcagtaattgaaattgagacaagagaggtc
ctcaaggtcttcccacttttcgaagcagttgagtcagtcattctggctcacaatggaaac
attgtaaccgttggagaagagggaacggttaaggaatgggtaattagctcaggaagcgtt
gttcgccgcaagaaaatcacagaagttggactggacttcttggtatacaatccagttcgt
gatcagctgctgatggcttctgcagaagaaaacatttttgtcgtttcttttgatgacttg
tcgttaaaacgacaaatcgttgggtttcacgatgaggtgtatgcgtgttctctgcttgga
aagaatgactcgcatcttgctgtcgcttcaaatgccaaagaagtacggctctacgacgta
gaaacgtgggattgccagatgatcgatggtcacagtgacagtgtcttgcacgtcactaca
gccccttttaaccgtcgtttgttagcatcgtgtagcaaagataattgtattattatctgg
agactcacagtgaaaactcagctgttcgtctaccctcgtagctcatgggaaggatgtgaa
ttgtgtcgatgttgcgctcaccgacaacatttgtataaaatggacaaaatggtcaagctc
tggcacattgattccggtaaaatgcggttgggtatcgccgggacgttgtcgggacatcga
aggggagtagctgatgcgagattttctccaaattccctgatactatttgtgaatcatggc
acacagctggtgtctggagacagtgcaggtatcgtaaagatctggacattggctacttcc
gagacagaggcatctatcgaagctcataatgacaaggcatacatttttgtctacttactt
atatgggcactattaccgaaccatgatgaaagtgaatatataagtgctggcacagatgga
cgcatcgtgatatggaaggacgtttcagaagaaaagaaattggaacaagaggcgaaactg
aggaggcgtatggaagaagagcaaactctaaccaactttctcgagcaagggcgttctcag
gaagcattgaggtttgcgttaggactggtaagaccattctgtgccttgaaggtaatagat
cagctaattgatcgtgatgagcttgcatccgctgttatgaaactggacaaacaacaaata
cagactttgctagatttcgcagctcagtggaataccaacagtcggacgtctttggcaagt
caaaatgtgttgaattgcatactgaaaattatcccgcctgacgaacttcttgactttagt
aatattagatctgttgttgagtcgttcattccttacacgaaaagaaaatctattgtaaaa
attctcgtcgttcagacatatggaacggttaaacaaagttcgtcaggatgtgtcgctact
aactttcacctggaatcaaatgcgtctcaactgatttttgtagatgttcctaagttttgt
tttgtatggtcgtttatcgacaaaagtatttcacctgtgctagttgtggcaaatggatcc
ttaatatctctttgttttgctaggaaaatgggggacgatttgccaatggaagacattgat
gacatgcctgagttgatagacgttgatgttccagcgcaattaccttcactaattgaacag
aatatagtgaaacctaaggaggtggaggagttcctacaagtacgtgtctctgatattccg
ccacgagctaaggaagttggtgtacttcaagctgctcctctatcgcaagaggtttcaaaa
aggaaaagaaaaagtaacacgaaagacgtcgagatggaagaatgcggcagtacagtggcg
ggaaacggagaaggcgatggtatggaagcttcatcacggcgcgccaagaaatccaaagga
gagaaaggcgaaatgcgcaagattcctgtaccgaaacatcgctatactccactgaaagac
aactgggtaaacattttcactccggtagtgaaaaatttaggactgcaaataagatttaca
aaaagtattgaattttcgtctggaattcagttctcaattttttgtgccttttgtacattg
gttcatatttgggctgctgacttcgtacgagcattcatacttggattcgacgttgccgat
gcactggccctcatccgacttgatcatttgtttcttgaaacatttgaggtggcagacgta
aaatcatcgctaaaaggcgataatcttagtcgcgctgtaggtcgaatagcaggaaaggac
ggacggacgaaacttgtcattgaaaacgttactaaaacaagaatagtgctggcggatacg
aaaatccacctattaggagcgtttcagaacctgaaacttgctcgaaatgctatttccagc
ctcatactgggtgcaccgccatcaaaagtctatgggaatctgcgtaatttggcatctcgt
tccagcgaacggctataa

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