Nakamurella antarctica: EH165_01750
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Entry
EH165_01750 CDS
T05729
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nak
Nakamurella antarctica
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nak03032
]
EH165_01750
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_01750
Enzymes [BR:
nak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EH165_01750
DNA replication proteins [BR:
nak03032
]
Prokaryotic type
DNA Topoisomerases
EH165_01750
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EH165_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF3987
Motif
Other DBs
NCBI-ProteinID:
AZI57077
UniProt:
A0A3G8ZJW5
LinkDB
All DBs
Position
381635..382687
Genome browser
AA seq
350 aa
AA seq
DB search
MAKLRKSNPSHPGITRRRSGRGWAFRHPDGTLVDRETRDRALALVIPPAWQDVWISPFSN
GHIQAIGTDEAGRRQYRYHDDWSTKRHHQKFERVLDFASKLEDARIRVAADLALEGMPRE
RALATAFRMLDRGHFRIGSEVYAESNGSFGLSTLRREHVRTKGSALVFSYVAKSGLDRVE
MINDPDLFAAVGVMRNRSRTEAELFGYKEGRRWRRIHSSDINAYVKDVVGMAVSAKDFRT
WHGTGIAAVALAEELSRFDAAKKWTEAARNRAASNAIKETAQRLGNTPAVCRGSYVHPQL
TELFRRDITVAAEVALVRQSLPKLTAVDDEIAVIAGHAEVERAVLHLLQK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactgcggaaatcaaacccctcgcacccgggtattacgaggcgccgcagcggc
cgggggtgggcttttcgtcatcctgacggcacccttgtcgaccgggagaccagagatcgg
gctctagcgctagtgatccccccagcctggcaggacgtgtggatcagcccgttctccaac
ggccacatccaggctattggcacagacgaggctgggcgtcggcagtaccggtaccacgac
gactggtccaccaagcggcaccatcaaaagttcgagcgggtgctggactttgcttcgaaa
cttgaggacgcccgcattcgggtggccgccgatttggcattggaagggatgccgagagaa
cgcgccctggccaccgcatttcggatgctggatcgtggacacttccgtatcgggagtgag
gtgtatgccgagtccaacgggagctttggcctctctacgttgcggcgagaacacgtgcgc
accaaaggttccgcgcttgtttttagctacgtcgcgaaatccggtttggatcgcgtggaa
atgattaacgatcccgatctttttgcagcggtcggagtaatgcgaaacagaagtcgaaca
gaagccgaactctttggttacaaggaggggcgtaggtggcgccggatccatagctctgac
atcaacgcgtacgtgaaagacgtggtgggaatggctgtatcggccaaagactttcggact
tggcacggaacgggtatcgctgcagtggccctggctgaggagctgtcgagatttgatgcg
gcgaagaagtggactgaggccgcccgtaaccgcgctgcgagtaacgccatcaaggagact
gctcagaggttgggtaacacgccagcggtatgtcgcggttcgtacgtccacccccaactg
acggagttgtttcggcgcgatatcaccgtcgctgcggaggtcgcactggttcggcagagc
ctgccgaaattgactgcggtggatgacgagatcgccgtgatcgccggccacgccgaggtt
gagcgtgcagtcctgcacctactgcaaaaatga
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