Nakamurella antarctica: EH165_01845
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Entry
EH165_01845 CDS
T05729
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nak
Nakamurella antarctica
Pathway
nak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH165_01845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nak03019
]
EH165_01845
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_01845
Enzymes [BR:
nak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH165_01845
Messenger RNA biogenesis [BR:
nak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH165_01845
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH165_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AZI57093
UniProt:
A0A3G8ZIE3
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All DBs
Position
403637..405844
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AA seq
735 aa
AA seq
DB search
MTKPDQAERLASGGLASGGPASGGPASGGPGVDRIELRERAEHHLRDLVQSQEAVLRADQ
WVAIEALVADRRRALVVQRTGWGKSAVYFVATALLRSMGAGPTVIISPLLALMRNQISAA
AAAGITAVTINSANAQEWGQTYQQVRAGEVDVLLVSPERLNNPGFRDEVLPGLAASAGLL
VVDEAHCISDWGHDFRPDYRRIRTMLTQLPAGIPVLATTATANERVMTDVAEQLETSAAG
VGADVLVLRGTLDRESLHLGVVTLPSQPARLAWLVEQLPKLQGSGIIYCLTVAATEQVAD
HLRANGFEVAAYSGQTDQAERLDAEQRLLGNQVKALIATSALGMGFDKPDLGFVIHLGMP
ASPIAYYQQVGRAGRGVSRATVVALPGTDDQQIWEYFGSLGFPPESAVRETLAVLGASPT
PISVPALEAQVSLRRSRLETMLKVLDVDGAVRRVAGGWVATGQAWVYDADRYDRVNTARR
GEQNSMLEYLSTTECRLQFLRRVLDDPGAGPCGRCDNCGGLALAMQVDAADVARAAERLN
KPGVPVEPRAMWPTAMSQLGVALSGKIAPGQRPEQGRAVARLDSLGHGSALRELFSSNTP
DGEVPIPLRHAMVAVLDDWDFPAGRPAGIVFIDSASRPLLVAHIAQGLGRFLKLPVLGSF
VLAQDGPLNTGQSNSAQRLKTVVNRHHLHLESNLGAGPVLLVDDYTDSGWTLTVTAKALR
EAGATAVYPFVLGVR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacccgaccaggctgagcgcctcgcatctggtggcctcgcatctggtggcccc
gcatctggtggccccgcatctggtggccccggtgtggaccgcattgagctgcgggagcgg
gcagaacaccacctgcgcgaccttgtgcagtcgcaagaggcggtgctccgcgcggatcag
tgggtggcgatagaagctctggtcgctgaccgcaggcgggcgctggtggttcagcgcacg
ggctgggggaagtctgccgtgtacttcgtggcgaccgccctactgcgctcgatgggtgct
ggccccaccgtgatcatctcaccgctactggcgctgatgcggaaccagatctcggccgcc
gctgcggccggcatcaccgcggtgacgatcaactctgccaacgcccaagagtggggccag
acctaccagcaggtgcgggccggcgaggtggacgtacttctggtgtcgccggagcggttg
aacaacccgggttttcgagacgaggtcctgcccggacttgcggccagcgcgggcctgctg
gtggtggacgaggcgcactgcatttccgattggggccacgatttccgaccggactaccga
cggatccgcaccatgttgactcagttgcccgccggtattccggtgttggcgaccacggct
acagcgaatgagcgcgtgatgacggatgttgccgaacaattggagaccagcgctgcgggc
gtcggggcagatgttctcgtgctgcgcgggacgctggaccgggagtctttgcacctgggt
gtcgtaacactgcccagccaaccggcgcggttggcctggttggtcgagcagctgccgaag
cttcaggggtcggggataatatactgcctcacggtcgccgccaccgagcaggtggcagat
cacctgcgggccaacggttttgaggttgcagcctattctggccagacggatcaggcggag
cgattggacgccgagcagcgactcctcggcaatcaggtgaaggccttgatcgctacttct
gctctcggaatgggtttcgacaaaccagatctcggtttcgtgatccacctggggatgcct
gcatcgccgattgcttattaccaacaggtgggccgcgccggccgcggtgtctctcgcgcc
accgtggtggcattacccggcaccgacgatcagcagatctgggagtacttcgggtcgctg
ggatttccgccggagtccgcagtgcgggaaacgctcgccgtactcggtgcttcgcccaca
ccgatctcggttccagctctagaagcgcaagtttcgctgcgcaggtcgcggttggaaacc
atgctgaaggtcctcgatgtcgacggtgcggttcgtcgcgtggccggcgggtgggtcgcg
accggccaagcctgggtgtacgacgcggatcggtacgaccgcgtcaatactgcgcgccgc
ggtgagcagaactcgatgctggaatacctttcgaccacagagtgccggcttcagtttttg
cgtcgcgtgctcgacgatccgggtgccggcccctgcggtaggtgcgacaactgcggtggg
ttggcgctcgcgatgcaggttgacgccgccgatgtcgcccgggccgccgagcgattgaac
aaaccgggtgtgccggtggagccgagggcaatgtggccgaccgcgatgagccagctgggt
gtggcattaagcggcaagattgcccccggtcagcgccccgagcagggtcgcgccgtcgcg
cggctggacagcctcggacatgggtctgcgctccgagagctgttctctagcaacaccccc
gatggtgaggtcccgattccgttacggcatgccatggtcgcggtcctcgacgattgggac
ttcccggctgggcgccccgccggcatcgttttcatcgactcggcgtccaggccactgttg
gtggcccacatcgcgcaggggctggggcgcttcttgaagctgcccgtccttgggtctttc
gttctcgcccaagacgggccgttgaacacaggtcagagcaactcggcgcagcgcctcaaa
actgtggtgaaccgtcatcatctgcacctggaaagcaaccttggtgcggggcccgtgctg
ttggtggacgactacaccgactcaggctggaccctgacagtgaccgcgaaagcgttgcgc
gaagccggcgccacggcggtctatcccttcgttctgggtgtccggtaa
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