Nakamurella antarctica: EH165_02815
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Entry
EH165_02815 CDS
T05729
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nak
Nakamurella antarctica
Pathway
nak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EH165_02815
09124 Replication and repair
03420 Nucleotide excision repair
EH165_02815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nak03021
]
EH165_02815
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_02815
Enzymes [BR:
nak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH165_02815
Transcription machinery [BR:
nak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EH165_02815
DNA repair and recombination proteins [BR:
nak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EH165_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZI57249
UniProt:
A0A3G8ZIR3
LinkDB
All DBs
Position
complement(645882..647558)
Genome browser
AA seq
558 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEISHPDASAARAQLAPFAELERSPEHIHTYRITPLALWNARAAG
HDAEQVVDALVRWSRFPVPQALLVDIVDTMGRYGRLVLRTVPGQGLVMVSNDRMVLEEIL
RHKKVAPMLGARIDADTVVVHPSQRGNLKQILLKVGWPAEDEAGYVDGEAHDIRLDESTW
KLRDYQSQAVDGFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVSGRQWRRE
LIARTSLTDEEIGEYSGERKEIRPVTIATYQVMTRKSGGEYRHLDLFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTLTDAERLGYAIAEPEEKYRIAATARTKMPVVQSILDRHVGEPTLVIGAYLE
QLEELGAELDAPIIQGSTRNSERERLFDAFRNGEINTLVVSKVANFSIDLPEATVAIQVS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTLDTEYAAHRQRFLAEQGYAYRIVD
ADDLLGPALPDPDAPKEQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggaccactgatcgttcagtccgacaagaccgttctcctcgagatctcccac
cccgacgcctcggccgctcgggcacagctcgcgccctttgcagagttggaaagatccccc
gaacacatccatacctaccgcatcacgccgctcgccctgtggaacgcccgcgccgccggc
catgacgccgaacaggtcgtggacgcgttggtccgctggtcgagattccccgtgccgcaa
gcgttgctggtcgacattgtggacaccatggggcgttacggccgattggtccttcgcacc
gttcccggtcagggtttggtgatggtctcgaacgacaggatggtgctcgaggagatcttg
cggcacaaaaaggttgctccgatgttgggcgcccggatcgacgccgacaccgttgtggtc
cacccttcgcagcgcggcaacctcaagcagattcttctaaaggtcggatggcccgccgag
gacgaagccggttacgtcgacggcgaagcgcacgacattcggctggacgaatcaacgtgg
aagcttcgggattaccagtcgcaggcggtagatgggttctgggccggtggttccggtgtg
gtggtcctaccgtgcggcgccgggaagacgatggtcggagcggccgcaatggcgaaagcc
ggtgccaccacccttattttggtgaccaacaccgtttccggccgacagtggcgtcgcgag
ctcattgcccgcacatcactcacggacgaggaaatcggcgaatactccggcgaacgcaaa
gaaatccgccctgtcaccatcgcgacctatcaggtgatgacgcgcaagtcgggcggcgaa
tatcgtcatctggatctgttcgactcccgcgattggggcctgatcatttatgacgaggtg
cacctgttacctgcgcccgtctttcggatgacggcggacctgcagtctcggcgtcgcctg
gggttgaccgcgactctggtccgcgaagatggccgcgagggcgacgtcttttcgctcatc
ggacccaagcgatatgacgccccttggaaggacattgaggcgcaggggtggatagctcca
gccgagtgtgtcgaggtacgggtcacgctgaccgatgccgagcgactcggatacgccatc
gccgaaccggaggagaagtaccgcatcgccgccacggcccggacgaaaatgcccgtggtg
caatcgattctggatcgtcacgtgggtgaaccgacgctggtgattggcgcttatttggag
cagttggaggagttgggcgccgagttggacgctccgatcatccaaggatccacgcgcaat
tccgagcgcgaacggctcttcgacgctttccggaacggggagatcaacacccttgtcgtg
tccaaggttgcgaacttcagcatcgatcttccggaagcgactgtggccattcaggtttcg
gggacgttcgggtcgcgtcaggaagaagcgcaacggctgggccggctgctccgccccaaa
ggtgacggtcggcaggcacacttttattctgtagtttcccgcgacaccttggacaccgaa
tacgctgctcatcgacaacgtttccttgccgaacagggttatgcctatcggattgttgac
gctgacgatcttctcggaccagcgttacccgatcccgatgcaccgaaggagcagtaa
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