Nakamurella antarctica: EH165_05210
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Entry
EH165_05210 CDS
T05729
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nak
Nakamurella antarctica
Pathway
nak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH165_05210 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nak03019
]
EH165_05210 (rny)
Messenger RNA biogenesis [BR:
nak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EH165_05210 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
Neur_chan_memb
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AZI57641
UniProt:
A0A3G8ZVD1
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Position
1183822..1185669
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AA seq
615 aa
AA seq
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MDNPVLIILEVLVVVLLAVLIYTQFRRRPEQQSQAPVLNDEFARQMMAQITAAQTKHTGS
MPSPAELEQAKKEAAELRRQAALDADKARAAATAAAEELRAAAVAQAEAIRSTARDEVSR
ERKEIRVELDQIRQRAQDEGLRAAELASVALKADRADLLAAQQAFTESSAQLARDLRAFD
SERAASVAARAEVDAGRTALEVRQEALHRDAAALQLREAELADQASVVTARAVEHERELE
RIGGLTVDEAKNQLLTKVEVQVRREAAIMTRRIEAEAEATAKQKARVIVADAVQKVASDQ
TSQSVVSVVHLPAEEVKGRIIGREGRNIRTFETVTGVNVIIDDTPEAVLLSCFDPVRREV
GRVTLMMLIEDGRIHPHRIEEAYERAQDEVEALCHRAAEDAMVEVGIAEVHPELMKLLGH
LKYRTSYGQNVLGHMVETGHIARGIAYEMGIDPAIVVRGAFLHDIGKALTHEARGSHAIV
GAELARRYGESEEVAHCIEAHHDEVSPSTIEAVLTQASDSCSGGRPGARRESLESYVQRM
ERIEAIASAKNGVEKVFAMQAGRELRVMVKPDVVDDIEAHMIAREVAKQIEEELTYPGQV
RVTVIRESRATEIAR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggataacccagttctgatcattcttgaagtgcttgtagtcgtgttgctggcggtactg
atctatacacagttccgacgacgccccgaacagcagtctcaagctcccgtccttaatgac
gaattcgcccgccagatgatggctcagatcaccgcagcccaaaccaagcacacaggttcg
atgccatcgccggccgagttggagcaggccaaaaaggaagcggcggaactacgacggcag
gcagctctggatgctgataaagccagagcagcggcaacagcagcagccgaggagctcaga
gccgcggccgtagctcaggccgaagcaatccggtctactgcccgcgacgaagtgagccgc
gagcgtaaggaaatccgagtcgagcttgaccaaatccgccaacgtgcgcaggacgagggc
ttgcgagcggccgaattagcttcggtagcgttgaaagctgaccgtgctgatctgctggcg
gcgcaacaggcattcaccgagtcgagcgctcaactggcgcgcgacttacgggctttcgac
agcgaacgagcagcttcggtcgctgctcgagctgaggtggacgccggacgcaccgcgctc
gaggttcggcaggaggcattacaccgcgacgcagcggcactgcagttgcgtgaggcagaa
cttgcggatcaggcaagcgtcgtgacagctcgggccgtcgaacacgaacgtgagcttgaa
cgaatcggcggtctcactgtggatgaggcgaagaatcagctgctcaccaaggtggaggtt
caggttaggcgcgaagcagccattatgacccgtcggatagaagctgaagccgaagccacc
gccaagcaaaaggctcgggtaatagttgccgatgcggtgcagaaagtggcaagcgaccag
acttctcagtcggtggtctcggtggtacacctccccgctgaagaggtgaaggggcgaatt
atcggccgcgaaggccgcaatattcgaactttcgaaactgtcaccggcgtcaacgtcatt
atcgacgacacgccggaggctgttctgctgtcatgtttcgacccggtccgccgcgaagtc
ggtcgcgtcacgttgatgatgttgatcgaagacgggcgcattcacccgcaccggatcgag
gaggcgtacgagcgcgctcaggatgaagtcgaggctttgtgtcacagggcggccgaggac
gcgatggtcgaggtcggcattgctgaggtacacccggagctgatgaagctgctggggcac
ctgaagtaccgcacgtcctacgggcagaatgtgttgggtcatatggtcgaaaccggccat
attgcccgcggtattgcgtacgagatgggtatcgacccggcaattgtggtgcggggggct
ttcttgcacgacatcggaaaggccctcacccacgaggctcgggggtcccacgcgatcgtg
ggtgcggagctggcacggcgctacggcgagagcgaagaggtggcgcactgcatcgaggcc
caccatgacgaggtgagccccagcacgatcgaggctgtcctcacgcaagcctctgattcg
tgctccggcggccggccgggtgcacggcgcgaatcgttggaatcctatgtccagcgcatg
gagcggatcgaggccatcgcgagcgccaaaaacggtgtggagaaggtcttcgctatgcag
gccgggcgtgaactacgggtgatggtgaaaccggacgtggtggacgatattgaggcgcac
atgattgcccgtgaggtagcgaaacagatcgaagaggagctgacttacccaggccaggtt
cgcgtcacagttatccgggaatcgagagcgacggaaatcgcgcgctag
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