Nakamurella antarctica: EH165_05455
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Entry
EH165_05455 CDS
T05729
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nak
Nakamurella antarctica
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nak03021
]
EH165_05455
Transcription machinery [BR:
nak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EH165_05455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_28
Docking
Motif
Other DBs
NCBI-ProteinID:
AZI57682
UniProt:
A0A3G8ZK10
LinkDB
All DBs
Position
complement(1241165..1242136)
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AA seq
323 aa
AA seq
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MVTSPSAVRAAATAADLDAQSPSADLVRVYLNGIGKTALLSAEEEVDLAKRIEAGLYAQH
KLDAGKRMTAKKSSDLKWVVRDGERARQHLLVANLRLVVSLAKRYSGRGMPLLDLIQEGN
LGLIRAVEKFDYAKGFKFSTYATWWIRQAISRGMADQGRTIRLPVHLVEQVNKLARLKRE
LHQALGRDATFAELAEESGIPEEKIADLLDHARDPVSLDMPVGTDEDAPLGDFIQDGEAT
SAEGIVVARFMNADIARVLDTLDERERTVVRLRYGLEDGRPRTLDEIGRVFGISRERVRQ
IERDSMAKLRVGDRSEALRSYAS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggttacctccccgagcgctgtacgcgctgccgccactgccgctgacctggacgcacaa
agtccatccgcggatctggtccgggtgtatctcaatggaattggcaaaacggcgctgctc
tcggcggaggaagaagtcgatctcgcgaagcgcattgaggctggcctgtatgcgcagcac
aaacttgatgccggaaaacggatgacggccaagaagagctccgaccttaagtgggtagta
cgcgatggcgagcgcgcgcgtcagcacctgctggtagcaaaccttcgtctggtggtgtcg
ctcgcaaagcgatactccggccgcggaatgccgttgctcgacctcatccaagagggcaac
ctcggcttgattcgcgccgtcgagaagtttgactacgccaagggtttcaaattctccacc
tacgcaacctggtggatccgccaggccatcagtcgcggaatggccgatcagggccgcacg
atcaggctcccagtgcacctcgtcgagcaggtcaacaagctggccaggctcaagcgcgaa
ctacaccaggcactcggcagggatgccaccttcgccgaactggcagaggagtccggcatt
cctgaggagaagatcgctgatcttctggaccacgctcgtgacccggtgagcctcgacatg
ccggtcggcacggatgaggacgccccactcggcgatttcatccaggacggcgaggcaacc
tctgccgaggggattgtggtagcccgctttatgaacgctgatatcgccagggtgctcgac
accctcgacgagcgcgagcggactgtggtgcggctgcggtacggcctcgaagacggtcgg
ccccgcacgttggacgagattggccgggttttcgggatctcccgcgagcgcgttcggcag
atcgaacgcgattcgatggcgaaattgcgagtgggcgaccgctccgaggcgctgcgtagt
tacgcaagctga
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