Nakamurella antarctica: EH165_07245
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Entry
EH165_07245 CDS
T05729
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nak
Nakamurella antarctica
Pathway
nak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EH165_07245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_07245
Enzymes [BR:
nak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EH165_07245
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EH165_07245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
HHH_RecD2
AAA_11
SH3_13
AAA_22
Helicase_RecD
AAA_16
PIF1
UvrD_C
AAA_5
HHH_5
AAA
DUF4350
PhoH
SLFN-g3_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZI57968
UniProt:
A0A3G8ZLE1
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Position
1655352..1657334
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AA seq
660 aa
AA seq
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MPEPATFTEFCNAGLWPGVGKVLAADLTAAGIRGPRDVNLATLSKLPRVTAKRADRLYTS
WIGAGLAYDVAELLVPEEISIRWVARLMESLGENAAQILRGDPWRLLVLPEALVSQADQL
ARSLDPGVRREDPRRGRALVAWTLNRFAREGHTATSAADVAAGLRPFGCDPALSIQASMD
AGEVVPVPDPTIDPLADDDAEFEPGDNSDDMAESRLGETPWIATLSLAEAEASIAENLAR
LQATAKPLAQPAVVTASSKGLDSVQISAVMHAAVHGVSLLTGGPGTGKSRTVAAIVEVAR
AASVVIALAAPTGRAAKRLEELTGAEATTIHRLLGARGGPVNSGDRFEKNSENQIEADVI
VIDEASMLDVELAAALLESIADGTHLVIVGDPAQLPSIGPGRVLGDLLDTKVLPTTHLST
LYRQSEGGSIARLATAVRGGTVPPVNDPTHEVVVVTARSSGEAAHRVVQLVTDSIPRVFQ
TPADQIQVVTPVHKGEAGTQALNRALKAALNPGRGQVRGFDKGDRVVATANHLDAEPNGY
ANGEVGTVIAADDNSLRVAFSVGESTIAGKALNDLLHGWAITVHRAQGSEWETVVVVVPA
EAGNMLSRPLFYTALTRARHHLSIVHAAGPALARAVEQIGERPRRTRLWSLVREEIGSLS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccgcaactttcaccgaattctgcaatgccggtctgtggcccggggtggga
aaggtgctcgcggctgacctcaccgccgccgggatacgcgggccaagagacgtaaacctt
gccacgctcagcaagctcccccgcgtcaccgccaagcgcgccgatcgtctgtacacctcg
tggatcggcgcgggccttgcctacgacgtcgcggaactccttgtccccgaggagatttcc
attcgatgggtcgcgaggttgatggaatccctcggtgagaatgcggcccaaatcctgcgc
ggcgacccgtggcgccttctcgtactaccggaagcccttgtctcccaagcagaccagctc
gccaggtcgctggacccaggcgtgcgacgcgaagacccccgccgcggccgagcactcgtg
gcttggacgttaaatcgtttcgcccgtgaggggcataccgccacctcggcagccgatgtc
gccgctggacttcgtcctttcggatgtgacccggcgctgtccattcaagcctcgatggac
gctggcgaggtggttccggtacccgatcccaccattgatcccttggccgatgacgacgcc
gaattcgagccaggcgacaactctgacgacatggctgaatcgcggctgggtgaaaccccc
tggatcgccaccttgagtttggccgaggcggaagcatccatcgcggaaaatctggcccgc
ctgcaggccaccgcgaagcctctggctcaacccgccgtcgttacagcctcgtcgaaaggg
ctggattcggttcagatcagcgcggtgatgcatgccgccgtgcacggcgtgagtttgctg
acaggaggccccggaaccggcaaatcccgcacggtggccgccattgtcgaggttgctcgc
gcggcaagtgtcgtcatcgccctagccgcccccaccggtcgcgcggccaagcgactcgag
gaactgacaggggccgaggcgaccactatccaccggttgctgggagcacgcggcggtccc
gtcaacagcggcgacaggtttgagaaaaacagcgagaaccagatcgaagccgacgtcatc
gtcatcgatgaggcatcgatgctggatgtagaactcgcagctgccctgctggagtccatt
gctgacgggacgcacctcgtgatcgtcggtgaccctgcccaactgccctccatcgggcca
ggccgggtgttgggtgacctgctggacaccaaagtgctgcccactacccacctttcgacc
ctgtatcgacagagtgaaggtggctccatcgccaggctcgccaccgcagtacgcggcggc
actgtgccgcccgtgaatgaccccacgcacgaagtggtggtcgtcactgcacgaagctcc
ggcgaggctgcacatcgagtggtccagttggtgacggactcgattccccgagtgtttcag
accccggcggatcagatccaggtggtgacccccgttcacaagggcgaggctggaacccaa
gccctgaaccgcgcactcaaggctgccctcaatccgggccgcggccaggtgcgcggcttc
gacaaaggggaccgggtagtggcgacagccaaccacctggacgccgaaccgaatggctac
gccaacggcgaggtgggcaccgtgatcgccgccgacgacaacagcctcagagtcgcgttc
agcgtgggtgaatcgaccattgcggggaaggctctcaatgacctcctgcacggctgggcc
atcacggtgcaccgcgcccagggaagcgagtgggaaacggtggtggtcgtggtaccggcg
gaggccggcaacatgctgtcccggccgcttttttacacggcgctcactcgcgcccgccac
catctctcgatcgtgcacgccgcaggcccagcattggccagggctgtcgagcagatcggc
gagcgtccccggcgcacccggctgtggtcgttggtccgtgaggaaatcggctcactgagc
tag
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