Nakamurella antarctica: EH165_07575
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Entry
EH165_07575 CDS
T05729
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nak
Nakamurella antarctica
Pathway
nak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EH165_07575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_07575
Enzymes [BR:
nak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EH165_07575
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EH165_07575
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EH165_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Rv2175c_wHTH
Ribosomal_S13
YhfG
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AZI58021
UniProt:
A0A3G8ZWH0
LinkDB
All DBs
Position
complement(1740779..1741657)
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVAALTSFVAENGGGQKVSKVSVSALGLLATVEPAPAALVGATLTATTRHGKFLD
FQFSPSSSRQADRPIHLVLFLARAGWLRWSDALSSVMPKMGGPIAMRLWFENGSGFDLTE
AGSRKSMTLWLVKDPLQVPGVAALGPDALTLTLEQFADLMARSPSRVKNVITDQRSLAGI
GNAYSDEILHTAMVSPFAVAKKLTDDAVARLYASMRSVLITASSRLEGQEAARLKGEKRS
GMRVHGMFGLPCPVCGDTVAQVEFADKSLQYCPTCQTGGRKLADRGMSRLLT
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaggtcgccgccttgacgtcgttcgtcgccgaaaacggaggcggg
cagaaggtttcgaaagtcagcgtgtcagcattgggcttgctcgccacggttgaacccgca
cccgcggctttggttggtgccactctgacggcaacgacccggcacggcaaatttcttgac
ttccaattctcaccgtcttcttcgagacaggcggatcggccaatccacttggtgctgttt
ttggcgcgagctggctggcttaggtggtccgacgcactctcttccgttatgccgaaaatg
ggcggacccatagcaatgcggctgtggttcgagaatggatccggttttgacctcaccgag
gctggaagtcgcaaatcaatgacgttgtggttggtgaaggatccactgcaggtaccgggt
gttgcggccctaggtccggatgcgctgaccctcactctcgagcagttcgcagatttaatg
gctcggagcccgtcgcgggtaaaaaacgtcatcaccgaccaacggagcttggcaggtatc
ggcaacgcctactctgacgagatcctgcacaccgcaatggtttcgccgttcgcggttgcg
aaaaagctcacggatgacgccgttgctcgcctctacgcttcgatgcgatcggtactcatc
acggccagctcgcgattagagggccaagaggctgcgcggctcaaaggcgagaagcgcagc
ggaatgcgggttcatggaatgttcgggttgccgtgcccggtgtgcggggacaccgtggcg
caggtcgagttcgccgacaagagcctgcaatattgcccgacgtgccagaccgggggacgc
aagctcgctgaccggggaatgtcgcgactgctcacctga
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