Nakamurella antarctica: EH165_09910
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Entry
EH165_09910 CDS
T05729
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nak
Nakamurella antarctica
Pathway
nak03420
Nucleotide excision repair
nak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EH165_09910
03430 Mismatch repair
EH165_09910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_09910
Enzymes [BR:
nak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH165_09910
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EH165_09910
MMR (mismatch excision repair)
Other MMR factors
EH165_09910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AZI58406
UniProt:
A0A3G8ZWL9
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All DBs
Position
complement(2236242..2238110)
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AA seq
622 aa
AA seq
DB search
MISDPLVGLDDEQRSAVLAPSGPLCVLAGAGTGKTRTITHRIAQLVQSGAHPAGEVLAVT
FTTRAAGEMRVRLRDLGVPGVQARTFHAAALRQLRYFWPKVTGEQVRPVIEQKLRLVAVA
SRRVGTGTDVATLRDLASEIEWAKATLLTPGTYVSGVAKVKRDTPLDAAVIAAAFDAYEQ
AKDASGQLDFDDILLNMCGALDADEAVAREFRSRYRCFVVDEYQDVTPLQQRVLDTWLGG
RDQLTVVGDANQTIYSFAGASPKYLLNFDRKYPHAAIVRLERDYRSTPQVVTLANRVIAG
ATGPSAKLRLRLRPVLPDGPEPVYSEHPDEATEARTVAQRCQAMIAAGMSAASIAVLYRI
NAQSEVFEQALATAGVPYLVRGGERFFARAEVRQAMMALRQAAESVAAGSDTAGLDAAGL
DAAGSVSAGLASSGQVAAVDSALSGTDRSAGAGTSIGTARVSPARILVAGAPSTLVPLTQ
RVLQTVGLTDTAPAPGALRDRWDALVALVGVAEGLADADPQAGLGELVAELNQRAEAQHA
PTVEGVTLASLHAAKGLEWEAVFLVGLTDGTMPIQHAETPEEVEEERRLFYVGVTRAKQQ
LFLSWGCPDPRVAEKRDGAVGF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggacccattagttggcttggacgacgagcaacgctctgcggttcttgctccc
tccggcccgctgtgcgtccttgccggggctggaacgggaaagacgcggaccatcacccat
cgcattgcgcagctcgtgcaatcgggagcgcatccggcgggcgaagtccttgctgtgacg
ttcacgacgagagccgcgggcgagatgcgggttcggttgcgcgatctcggcgttccggga
gttcaagcccgaacttttcacgccgcggcgctccggcagcttcgctatttctggccgaag
gtcacgggcgagcaggtccgacccgttatcgagcagaaacttcggctggtggcggttgcc
tcgcgtcgagtaggcaccggcaccgacgtggcaactttgcgagacctagccagcgagatc
gagtgggccaaagcgacattgctgactcccggcacgtacgtgtccggggtcgcgaaggtc
aagcgggacaccccgcttgacgccgccgtcatcgccgcagcattcgacgcctatgaacag
gccaaggacgcatcgggacaactcgattttgacgacatcctgctgaatatgtgcggtgct
cttgatgcggacgaagctgtggctcgcgaattccgttcccgctataggtgtttcgtcgtc
gacgagtaccaagatgtgacgccactgcagcagcgggtcttagatacctggctgggcggc
cgcgaccaattgaccgtggtgggcgatgcgaaccagaccatctattcctttgccggagcg
tctccaaaatacctgttgaatttcgatcggaaatatccgcacgccgcgattgtccgtctt
gaacgcgattaccgttccacaccgcaggtggtgacccttgccaaccgggtgatcgcgggt
gccacaggaccttcggcaaagttgcgtctacggttacggccggtcctgcctgacggtccg
gagccggtctactccgaacaccccgatgaggccactgaggcccgcaccgtagctcagcgg
tgccaagcaatgatcgctgcgggcatgtcggctgcctcgatcgccgtgctgtaccggatt
aacgcgcaatccgaggtctttgagcaagcacttgcgacagcgggtgtgccatatctggtg
cggggtggtgaacgcttcttcgcgcgggccgaagttcgccaagcaatgatggcgttgcgc
caggctgcggaatcagttgctgcaggttcagacactgcagggttagacgctgcagggtta
gacgctgcagggtcagtttctgcgggactggcaagcagcgggcaggtggcagccgtcgac
tctgcgctttccggtacggataggtcagcaggcgccggtacgtcgattggcaccgcccgc
gtgagccccgcgcggattctcgtcgcgggtgcgccgagcacgttggtgccgctgacccag
cgcgtgctgcaaacggtcggtcttaccgacaccgcgccagcgccgggcgcgctgcgcgat
cgatgggacgcgttggtcgcgctcgttggggtggcagagggcctcgccgacgccgatccg
caagcagggctgggggagttagttgccgaactgaatcagcgggcagaagcgcagcacgcg
cccaccgttgaaggcgtgaccctcgcctctttgcatgcagccaaaggtttggaatgggag
gcagtgttcctcgtcggactcacggacggaaccatgcctatccagcatgctgagaccccg
gaggaagtcgaggaggaacggcgcctcttttatgtcggcgttaccagggccaagcaacag
ctgttcctctcttggggctgtcccgatccgagggtggccgaaaaacgagacggcgcagta
ggtttctga
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