Nakamurella antarctica: EH165_11235
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Entry
EH165_11235 CDS
T05729
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nak
Nakamurella antarctica
Pathway
nak03420
Nucleotide excision repair
nak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EH165_11235 (pcrA)
03430 Mismatch repair
EH165_11235 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nak03400
]
EH165_11235 (pcrA)
Enzymes [BR:
nak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH165_11235 (pcrA)
DNA repair and recombination proteins [BR:
nak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EH165_11235 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EH165_11235 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZI59575
UniProt:
A0A3G8ZS01
LinkDB
All DBs
Position
complement(2527852..2530476)
Genome browser
AA seq
874 aa
AA seq
DB search
MAPPEPPSDGYGDDDFDSRAADGGLFGAPADAHTAPDNWDGTHPAQKFRPHAPGSSAAAY
QPRQLNIEELLEGLNDQQRAAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLGVGGATPGE
ILAITFTNKAAAEMKERVAELVGARARSMWVSTFHSMCVRILRNEATHLGYKSTFTIYDS
ADSQRLVALVAADLDLDSKRFPARSLAAQISNLKNELLDPATAAERADSDIAKVVAEVYA
GYQARLKAASALDFDDLIMETVALLQVFPAVAEHYRRRFRHVLVDEYQDTNHAQYTLVKE
LVGGAHDAREVRAADGELVRAATSSIPAAELVVVGDADQSIYAFRGANIRNIVEFERDYP
SARTILLEQNYRSTQTILSAANAVISRNPERRAKNLWTAAGNGEMIVGYVADNEHDEAAF
VTKEIDRLVDEGSIRFGDVAVFYRTNSSSRAFEDVFVRMGMPYKIVGGVRFYERKEVRDA
LAYLRALANPADEVSLRRILNTPKRGIGDRAEAALAVYSQKEKVPFAQALASVADIPFIA
TRSVKAISGFNEMMDLLRADLDGGAEPADLLTSVLEKSGYTELLEISSDPQDASRLENLE
QLVTVLRERVEILQGGEENFAAGAPLLAAVLEQLSLVADADSIPDSEAGMVTMMTLHTAK
GLEFPVVFLIGWEDGLFPHMRALADDKELAEERRLAYVGITRSRERLYISRAVTRSTWGQ
PGANPASRFIQDIPEELVDWQRLAEAPDYGSGSQSWYGGGGSRSAPVSAGRFSSSGGFSG
SGSSFGSGTGGSQYGESAQSRLAATGTKSTGRTGWQNSATLALAVGDRVSHDKYGLGTVI
ASEGVGVRATATIDFGAAGKIRLMLIGGVPLTKL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccggaaccgcccagcgacggttatggcgatgacgacttcgactcacgggct
gctgacggcggcttgttcggagcgccggccgacgcgcacaccgcgccggataactgggac
gggacccacccggcgcaaaagtttcggccgcacgccccggggagctctgcggcggcttac
cagccgcgacaactcaacatcgaagaactactcgaaggtctcaacgaccagcaacgcgcg
gccgtcgaacaccgcggcgccccgttgctcgtggtggcgggcgcggggtctgggaagacc
agggtcctgacgcgccgcatcgcctaccttttaggtgtcggcggggccacccctggcgag
atcctggcaatcaccttcaccaacaaggctgccgctgaaatgaaggagcgggttgccgag
ctggtgggtgcccgggcccgatccatgtgggtgtccacgttccactcgatgtgcgtgcgg
atcctgcgcaacgaggcgacacacctcggctacaaatcaacgttcaccatctacgattcg
gccgattcgcagcggctcgtggcactggttgcagccgacttagaccttgatagcaaacgg
ttcccggccaggtcgctggctgcccagatcagcaacttgaagaacgagttgcttgacccg
gcgactgccgccgagcgcgcagactccgatatcgccaaggtggtggccgaggtatacgcc
ggctaccaggcccggctcaaagctgcctcggctctggattttgacgacctgattatggaa
accgttgcgttgctgcaggtttttccggccgtggccgaacattaccgtcggcgatttcgt
catgtgctggtggatgagtaccaagacaccaaccacgcccagtacacactggtcaaagag
ctcgtcggcggcgcgcacgatgcgcgtgaggtccgcgccgccgatggtgaactcgttcga
gcagcgacctcgtccattccggccgccgagttggtcgtggtgggcgatgccgaccaatcg
atctacgccttccgcggcgccaacatccgcaatatcgtggagttcgagcgcgattacccc
agcgcccgaaccatcctgctggaacaaaactatcgctccacccagaccattttgtcggcc
gcgaatgccgtcatttcacgcaacccggaacgccgagcaaaaaacctctggactgccgcg
ggcaacggcgaaatgattgtgggctacgtcgccgacaatgagcacgacgaggcagccttc
gtcaccaaggaaatcgacaggttggtcgacgaaggcagcatccggttcggcgatgtcgcc
gtcttctaccgaaccaactcctcgtccagggccttcgaggatgtgttcgtccggatgggg
atgccgtacaaaatcgttggtggggtgcgattttacgagcgcaaagaggtcagggacgcg
ttggcgtatctgcgagcgttggccaacccggctgacgaggtgtcattgcgccggatcctg
aacaccccgaaacgcggtattggcgatcgcgccgaagcggcgttggcggtgtactcgcaa
aaggagaaggtcccgttcgcgcaagccctagcgagcgtggcagacattccctttatcgca
acgcgttcggtgaaggccatttcgggtttcaacgaaatgatggacctgctgcgggccgac
ctcgacggcggcgccgaaccggctgaccttttgacgtcggtcttagaaaagagcggctac
accgaacttctcgagatcagttccgatccgcaggacgcttcgcggctggaaaacctcgaa
caattggtgacggtgctgcgggaacgagttgagattctgcagggcggggaagagaatttc
gcggcgggtgcaccgctgctcgccgctgtgctggaacaactctcgctggttgccgatgcc
gactcgattcctgactccgaggcgggaatggtcacgatgatgaccctgcacaccgcgaag
ggtctggagtttcccgtcgtgtttctgattggctgggaggacggactcttcccccatatg
cgggcccttgccgacgacaaggagctcgccgaggagcggcgtctcgcctacgtcgggatc
accagatcccgcgagcggctgtatatctcgcgcgcggtgacccggtcaacgtggggtcag
cccggcgctaatccggcttcccggttcatccaggacatccccgaggaactggtggactgg
cagcgactggctgaagcccctgactacggttcaggttctcagagctggtacggcggtgga
ggttcgcgctccgcgccggtctctgccggaagattctcctccagcggcgggttcagcggc
tcgggttccagctttggctccggaactggtggctcacagtacggcgaatcggcccaatcc
cgtttggctgcaacgggaaccaagtcaaccggccgcaccggctggcagaactccgcgacc
ctcgcgctagcggtgggggatcgggtgtctcacgacaagtacggtctcggaacggtgatc
gcctcagagggcgtgggggtgcgagccaccgcaaccatcgactttggcgccgccggcaag
atccggttgatgctgattggcggcgtcccgctcaccaagctgtga
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