Nakamurella sp. PAMC28650: H7F38_04365
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Entry
H7F38_04365 CDS
T08954
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H7F38_04365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naka03400
]
H7F38_04365
Enzymes [BR:
naka01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H7F38_04365
DNA repair and recombination proteins [BR:
naka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H7F38_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QNK83515
UniProt:
A0A7G8WT22
LinkDB
All DBs
Position
954962..958321
Genome browser
AA seq
1119 aa
AA seq
DB search
MNLLEPRPFDIRDPLPTGTTVLEASAGTGKTYTVGALVTRYVAEGRATLEELLVVTFGRA
ASQELRERVREQLVAAERALADPDTARIDSNDLIVLLAEADGPEVALRRQRLRRALADFD
AATIATTHQFCQQVLTGLGVAGDSEPGATLVEDLDDLVVEVVDDLYVRRFGAAGAEAPQI
DRAMALELGRRAVGDPGARLEPAAEPADSLSALRFRFAGAVRAEVDRRKRQRGLLGYDDL
LSRLADALEPAGVENAARMRMQDRWKIVLIDEFQDTDPVQWDVLRLAFAHVATLLLIGDP
KQAIYAFRGGDVYTYLAAARTADARATLGQNWRSDAPLVAALQVLFDGAELGEQEIVVRP
VRSAHAGSRLTGAPSGHPLRLRVATREQFGKGPRAKVYMDQVRPLIAEDLAADVARLLAS
GARFDERALVAGDVAVLVNTHVQGLIIREALAALDIPSVTAGAGSVYATAAGGDWLTLLE
ALEQPHRSARVRAAALTPFLGRTAEQLDRGGERLTDELGTLLRNWADLLQSRGVAALLEL
SFAEQGLPGRVLGEVDGERRLTDLRHLGQGLQAAAADEGLGLAALVEWLRRRRAEAAVET
NTDRIRRLDSDAAAVQVMTLHVSKGLQYPVVYLPFAADRWVNSEPKVLQLHDNDGRRVLD
VGGFQSTGRQERERRAAREQAGEALRLLYVGLTRGQSQVVMWWVPSSNTPDSGLHRLLFG
RTPGSGEIPDTAALPGDDEVQRRLAELQARGGPAIESALPARYPRVPLPVVSDKGFAIGT
FARSLDTAWRRASYSALSAAGDRSREAVASEPETGERDDEVMPEVVAVDDAPENALVPDE
LLVLHRTPSPMADLPAGTSFGTLVHAVLEHTDPQAADLSAELTQRSAEQLARHSGTMTAG
QLAAALLPVLSTPLGPIADHLSLNDFSVADRLTELDFELPLAGGDHPTAEITLGQLAPLI
RRHLPADDPLLHYADRLASPEMSWQPLRGYLTGSLDAVLRLPGPRYLIADYKTNWLGGDD
AEPLSAWHYRPAALQQAMTHSDYPLQALLYSVALHRFLRWRQPGYDPDRHLGGAVYLYVR
GMSGPATPLVDGLPCGVFGWRPPADLVRELSTLLDQGTP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgttggaaccacgccccttcgacatccgggatccgttgcccaccggcaccacg
gtgctggaggccagtgccggtaccggcaagacgtacacggtcggggctctggtgacccga
tacgtcgccgagggcagggcgaccctggaggagttgctggtcgtcaccttcgggcgggcc
gcgagccaggagctgcgcgagcgggtgcgggagcagttggtggccgccgagcgcgccctc
gcggacccggacacggcgcgcatcgacagcaacgatctcatcgtgctgctcgccgaggcc
gacgggcccgaggtggcgttgcgtcgccagcggctgaggcgggcgctcgccgacttcgac
gccgccaccatcgcgaccacccaccagttctgccagcaggtgctgaccgggctcggggtg
gccggcgacagcgagccgggagcgacgctggtggaggacctggacgatctggtggtcgag
gtggtcgacgatctctacgtccggcggttcggcgccgccggtgccgaggcgccgcagatc
gatcgggcgatggccctcgagctgggccgccgggccgtcggcgatcccggggcccgcctg
gagcctgctgctgaaccggcggactcgttgtccgcgttgcggttccgtttcgcaggtgcg
gtcagggccgaggtcgatcggcgcaagcgacagcgcggtctgctcggctacgatgacctg
ctgagccgtctggccgatgcactcgagccggccggtgtcgaaaacgcggcgcggatgcgg
atgcaggaccggtggaagatcgtcctgatcgacgagttccaggacaccgatccggtccag
tgggacgtgttgcggctggccttcgcccacgtcgcgacccttctcctgatcggcgacccg
aagcaggccatctatgcgttccgcggcggcgacgtctacacctacctggccgccgcccgg
acggcggatgcgcgcgccaccctcggtcagaactggcgcagcgacgcaccactggtggcg
gcgctgcaggtcctgttcgacggcgccgaactcggggagcaggagatcgtcgtccggccg
gtgcgttcggcgcacgccggctcccggctcaccggggcgccgtcgggtcatccgttgcgc
ctgcgggtggccaccagggagcagttcggcaagggtccgcgggccaaggtctacatggac
caggtgcgaccgctgatcgccgaggacctcgccgccgacgtggcgcggttgctcgcctcc
ggggctcgtttcgacgaacgtgctttggtggctggggatgtcgccgtgctggtgaacacc
cacgtccagggtctgatcatccgtgaggcgctggccgcgctcgacatcccgtcggtgacg
gcgggagccgggagtgtctacgccacggcggcgggcggggactggctgaccctgttggag
gcgctggagcagccacaccgttcggctcgggtccgcgcagcggcgctgacgccgttcctg
gggcgcacggccgaacaactcgaccgcggcggcgagcggctgaccgacgaactgggcacc
ctcctgcggaactgggcggatctgttgcagtcccgcggagtggctgccctgctggagctc
tcgttcgccgagcaggggctgccgggccgggtgctcggtgaggtggacggcgagcggcgg
ctcaccgatctccgtcacctcggccagggactgcaggccgccgcggcggacgagggtctg
gggctggccgccctggtcgagtggctgcggcgtcgtcgggccgaagcggccgtcgagacg
aacaccgaccgcatccgacggttggacagcgacgcggccgccgtccaggtgatgacgctg
cacgtgagcaagggcctgcagtatccggtggtgtacctgccgttcgcggccgaccgctgg
gtcaactccgagccgaaggtgttgcagctgcacgacaacgacggtcggcgggtgctggac
gtcggaggattccagtcgaccggacggcaggaacgggagcgccgggcggccagggagcag
gccggcgaagccctgcgtctgctctacgtcgggctgaccagggggcagtcccaggtcgtc
atgtggtgggtgccctcgagcaacacgccggactccggcctgcatcggctgttgttcggc
cgtacgccgggcagcggcgagatcccggacaccgctgccctgcccggtgatgacgaggtc
cagcggcggctggccgaactgcaggccaggggcggccccgccatcgaatccgcgctgccc
gcccgctacccccgggtgccactgccggtggtctccgacaagggttttgccatcggcact
ttcgccagatcgctggacaccgcctggcggcgggcctcctacagtgcgctgtcggcggcc
ggcgatcggagccgggaggcggtggccagcgagcccgagaccggtgaacgggacgacgag
gtgatgcccgaggtcgtggctgtcgatgatgcccccgagaatgcgctggttccggacgaa
ttgctggtactgcaccggaccccctcgcccatggcggatctgccggccggaacctcgttc
ggcaccctggtgcacgcggtgctggagcacaccgacccgcaggccgccgatctgtccgcc
gaactcacccagcgcagcgccgagcagttggcgcgacactccggcacgatgacggccgga
cagctcgcggcggcgctgctcccggtgctgtccaccccgctcggcccgatcgcagatcat
ctgtccctgaacgacttcagcgttgccgatcggctgacggagctggacttcgagctgccc
ctggccggcggtgaccatccgacggccgagatcaccctggggcaattggccccgttgatc
cgtcgtcatctgccggccgacgacccgctccttcactacgccgaccggctggcgtccccg
gagatgtcctggcaacccttgcgcgggtacctgaccggaagcctggacgccgtgctgcga
ctgccagggccccgctacctgatcgccgactacaagacgaactggctgggcggcgatgac
gcagaacccctgtcggcgtggcactaccggccggcggcgctgcagcaggcgatgacgcac
tccgactatccgctgcaggctctgctgtattccgttgcgctgcaccggttcctgcgctgg
cggcaacccggctacgatcccgaccggcacctcggcggggcggtctacctgtacgtccgc
ggaatgtccgggccggccacccccctcgtcgacgggctgccctgcggggtcttcggctgg
cgtccacccgctgacctggtgcgcgaactgtccaccctgctggaccaggggacgccatga
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