Nakamurella sp. PAMC28650: H7F38_11565
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Entry
H7F38_11565 CDS
T08954
Name
(GenBank) EndoU domain-containing protein
Organism
naka
Nakamurella sp. PAMC28650
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
EndoU_bacteria
T7SS_signal
HAUS-augmin3
Motif
Other DBs
NCBI-ProteinID:
QNK83218
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All DBs
Position
2534789..2539426
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AA seq
1545 aa
AA seq
DB search
MNHSSFELTGDVGSIRSSADHWSLFAVATSAAADDIRSIDSGGFEGDEADLYHQRLNGDL
PPHLDTASDAWGAVSTALKTYASALEALQSRMSTLTAQAHDQQSQVDAANIQVADAHTAD
ARHVASVDAEQKALKPGGLTAVDTYQPQTTGAASRLEAANGQLQSTTDAANRVHQEHSAA
ADTCVNAINQAAGLRFEEPPGFWGRLKGSVVGWIKDHADVLLAISSVLKQISSIAGLLAM
IPILAPIMGPIAAVSGGAALVIDTTVHAATGKGSLTDILIDGAGMLPFGRALTALKGAKA
GENAARAGDNAWAGENAARAGENAGRAGENAARAAEGDVGEATTATVGTRHASSDARAVA
SDGKAGGRASEGPGNATNSKTPVDLHKCAGDPIDVVTGEMIMSQTDLTLPGVLPLVLRRV
HISSYRWGSLFGPTWASTLDQRVEIGSDGGVCFVAEDGVVLYFPDAAQTRPGAAFLPTEG
IQRWPLRQAADGGWTIENPDEGVSRRFARPDGHGRCAVQEIFDRAGNAIHFEYDSEGIVC
GLRHSGGYRVDINTEASHVGSISVRNLGTSTVVAAFGYDLAGNLVRVGNSSRGALVFECD
DHGRIVKWSDRNGLWYRYDYDENGRCVRTSGRGRVLSYGFSYLPGRTLVTDSLGAIATYE
YNEARQVTREIDPLGNVTATTWDRYDRLLLRTDALGRCTQLKYDASGRLIEVIHPDGQSE
SGQRNRLGLIETTTDVTGARWSRTFDDTGALLSVIDPLGHLTRYTRARSGALSSVTDPLG
GRTTVSTDGAGLPVRVIDALGGETAFTYDGFGRLTLAIDPLNNVTTFSWTTEGWLSGRIN
PDGAREEWAWDGEGNLTAHTDAAGHTTEITNGVFDLPIARITPDGSRMLFGYDTELRLIS
VQNPAGLRWRYEYDRAGRLVRETDFNGREQGYEYDALGRLTAVVNGVGQRTGLAYDLAGD
LVERSGGDGMTRFGYDGAGRMISAESMDAVVHLDRDGLGRVLRETVNGRTLSSTFDALGR
RTSRVTPSGVSSEWTYDAVGRPATLATAGQSVDFQFDAAARETGRFFSAGGRVDQTFDVA
GRLIAQVMRGAYPSSDVPTAAASSMTTARSFDYRIDGALTRITDLRAGTARRFDLDSSGR
VLGVRAVDWSESYAYDRSGNVALSDSHGGSEKVDGRGRREYSGTLITRAGDVTYRHDGQG
RVVTRSRKVLSSKPETWHYSYDTSDRMVQALTSGRRWTYSYDSLGRRISKQRLDRDGRIV
DQTLFSWDGNRLIEQSRFSESAGRPLVSTWEYLPGSWRPITQTVGPAADDLEFYAVISDL
VGTPTELVTADGARVAWTNGDRTLWGAPAGRGEAAAKNTGGLSKYSVDCPLRFPGQYADD
ETGLHYNRHRYYDPASARYTTADPLGLAPAPDPHSYVANPTGWADPLGLGPCRDVGQNAI
ETVNLATPDRTRHVLDGEVRSNGSYGGGHRGGTSYPGKSEFPRTWSDEQIMHHISDVATD
PMSLSRPSGRGSTFVTATRDRIDIEVLIRNGQIWTGYPTNVLRNQ
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattcgagcttcgagctgaccggtgacgtgggttcgatccgatcgtcagccgat
cactggtcactgttcgccgtcgctacctcggcagccgccgacgatatccgaagtattgat
tctggtggattcgagggcgacgaggccgacctgtatcaccagcgactcaatggcgacctg
cccccacatctggacaccgcctccgacgcgtggggcgccgtttcgacggcgctcaagact
tacgcgtcggccctcgaagcgctgcagtcccggatgtcgaccctgacggctcaggcccac
gatcaacaatcgcaggtggatgccgccaacatccaggtggccgatgcgcacactgccgac
gctcgccacgtggcgtccgtggacgccgagcagaaggccttgaaaccgggtgggctgacg
gcggtcgacacctatcaaccgcagacgacgggcgcagccagccggctcgaggcggcaaat
ggtcagctgcaatcgacgacggatgcagccaaccgggtccaccaggaacacagcgctgcc
gccgacacctgcgtcaacgccatcaatcaggccgccggcctgcgcttcgaagagccaccg
ggcttctggggtcggttgaagggttcggtcgtcgggtggatcaaggaccacgccgacgta
ctgctggcgatctccagtgtgttgaagcagatctccagcattgccgggctgctggccatg
attccgatcctcgccccgatcatggggccgatcgcggccgtgagcgggggcgccgcactg
gtgatcgacaccaccgtccatgcggccaccggcaaaggatcgctgacggacatcctgatc
gacggcgccggcatgttgccgttcggaagggcgctcaccgcgctcaagggcgccaaggcc
ggtgagaatgccgcccgggccggcgacaacgcttgggccggcgagaacgccgcccgggcc
ggcgagaatgccggcagggcgggcgagaatgccgccagggcagccgaaggcgacgtcggg
gaggcgacgaccgcgaccgtcggcacccgacatgcgtcgtcagatgcgcgggcggtcgct
tccgacgggaaggccggaggcagggcctccgaagggcccggcaacgccaccaactccaag
actccggtcgacctccacaagtgtgccggggatccgatagacgtcgtcaccggcgagatg
atcatgtcgcaaaccgatctcactcttcccggtgtactgccgttggtgctgcggcgggtc
cacatcagctcgtaccgctggggttcgctcttcggtccgacctgggcctcgactctggac
cagcgggtggagatcgggtccgacggaggcgtgtgcttcgtcgccgaggacggggtcgtc
ctctactttcccgatgctgcgcaaacgcggccgggcgctgcgttcctacccaccgagggt
atccagcggtggccgcttcggcaggccgccgacggtggatggacgatcgagaatccggac
gagggtgtcagtcgccgtttcgcccggccggacggacacggacgttgtgcggtgcaggag
atcttcgatcgtgccggcaacgccatccacttcgagtacgactccgaagggatcgtctgc
ggattgcgccattccggtgggtatcgcgtcgacatcaacactgaggcctcgcatgtcggg
tcgatatcggtccgcaacctggggacgtcgactgtggtggccgccttcggttacgacctg
gccgggaacctcgtgcgggtcggcaactcatctcgcggagcgctcgtcttcgaatgcgat
gaccacggccggatcgtgaagtggagcgaccgcaacggcctttggtatcgctatgactac
gacgagaacggccgctgcgtgcggacatccggtcgcggacgtgtgttgtcctatgggttc
tcctacctccccggccggacgttggtcacggattcgctcggagcgatcgccacctacgag
tacaacgaggcccgacaggtgacgcgcgagatcgacccgctcggcaacgtgaccgcaaca
acctgggaccgatacgaccgtctgctcctgcggaccgatgcactgggtcgctgcacgcag
ttgaaatacgacgcgtccggccgactgatcgaggtcatccatccggatgggcagtcagaa
tcggggcagcgcaaccgtctcgggctcatcgagacgaccacggatgtgaccggggcgcga
tggtcacgaacgttcgacgacaccggcgccctcctctcggtcatcgatccgctcgggcac
ctcacccgctacaccagggcgcggtcaggcgctctctcctccgtcaccgatccactcggt
ggcaggacgacggtgtccacggacggcgccggtctgccggttcgggtgatcgatgcgctc
ggcggcgaaactgccttcacctatgacggtttcggccgactgacgctggcgatcgatccg
ctcaacaatgtgacgaccttcagctggacgacggagggatggctctcaggacggatcaac
ccggacggtgcgcgcgaggagtgggcctgggacggcgagggcaatctcacggctcacacc
gatgcggccggccacacgacggagatcaccaacggtgtcttcgatctcccgattgccagg
atcacaccagatggtagccggatgctcttcgggtacgacacggaattgcggctcatctcc
gtccagaatccggccggtctgcgctggcggtacgagtacgaccgcgcggggcgattggtc
cgggagaccgacttcaatggtcgggaacagggttatgagtacgacgcactcggtcggttg
acagccgtcgtcaacggggtcgggcagaggacaggactggcgtacgacctcgccggagat
ctcgtcgagcgcagcggcggcgacggcatgaccaggttcggctacgacggcgccggccgg
atgatcagcgcggagtcgatggatgcggtcgtgcatctggaccgcgacggactgggccgg
gtgttgcgcgaaaccgtcaatggccggactctgtcaagcacattcgatgccctgggccgc
cggacctctcgcgtgaccccgtccggggtgtcgtccgaatggacctatgacgccgtcggg
cgtcctgcgacgttggcgaccgccggccagagcgtcgacttccaattcgacgccgccgcc
cgtgagaccggccggttcttctcggccggggggcgggtagatcagaccttcgacgtggcc
ggccgactgatcgcgcaggtgatgcgaggggcatacccgtcgtcggatgtccctaccgct
gctgcatcgtcgatgacgaccgcccgcagcttcgactaccgcatcgacggtgcgctgacc
cggatcacggacctgcgggccgggaccgcgcggcgcttcgatctggacagctctggtcgg
gtgctcggcgttcgggctgtcgactggtccgagtcctatgcctacgaccggtcgggcaac
gtcgcactctccgactcccacggaggtagtgagaaagtggacggacggggacgacgcgaa
tattccggcactctgatcacccgggccggcgacgtgacgtaccgccacgacgggcaggga
cgcgtcgtgactcggtcgcgcaaagtgctgtcgagcaagcccgagacgtggcactacagc
tacgacacctccgaccggatggtgcaggcgctcacgtccggacggcgctggacctacagc
tacgactccctcggacggcgtatcagcaagcaacgcctcgaccgcgacggtcggatcgtg
gatcagaccctgttcagctgggacggaaaccgcctgatcgagcagagccggttcagcgaa
tcggccggccggccgctcgtctccacctgggagtacctaccgggcagctggcgcccgatc
acccaaacggtggggccggcggctgacgacctggagttctatgcggtgatcagcgacctg
gtcggaacacccaccgagttggtcacggccgatggggcccgcgtagcgtggacgaatggt
gatcgcacattatggggcgcgccggccggtcgcggtgaggcagccgccaagaatacgggc
ggactctccaagtactcggtggactgcccgctgcgcttccccgggcaatatgccgacgac
gagaccggtctgcactacaaccgtcaccggtactacgacccggcatcagctcgatacacc
accgcggatccgcttggacttgcgcccgcgccggacccgcacagctacgtggccaacccg
acgggctgggctgatcctcttgggttggggccgtgtagggacgttggtcagaacgcaatt
gagacggtcaacctcgcgaccccagaccgcacgagacacgtactcgacggggaggtgcga
tcaaacggatcgtacggtggtgggcaccgaggaggaacaagctatccaggtaagtcagag
tttccgcggacgtggtcagacgagcaaatcatgcatcatatttctgatgtggcgaccgac
ccgatgtctctttcaaggccatcaggtcgagggagcaccttcgtgacagcaacacgagat
cggatcgacatcgaggtgctgattcgaaacgggcaaatctggactggctaccctaccaat
gtacttaggaaccaatga
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integrated database retrieval system
