Nakamurella sp. PAMC28650: H7F38_12525
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Entry
H7F38_12525 CDS
T08954
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka00260
Glycine, serine and threonine metabolism
naka00630
Glyoxylate and dicarboxylate metabolism
naka00670
One carbon pool by folate
naka00785
Lipoic acid metabolism
naka01100
Metabolic pathways
naka01110
Biosynthesis of secondary metabolites
naka01200
Carbon metabolism
Module
naka_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H7F38_12525 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H7F38_12525 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
H7F38_12525 (gcvP)
00670 One carbon pool by folate
H7F38_12525 (gcvP)
Enzymes [BR:
naka01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
H7F38_12525 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QNK83716
UniProt:
A0A7G8WTM3
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All DBs
Position
2751147..2753996
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AA seq
949 aa
AA seq
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MDPENFADRHIGVDVPGLAAMLEALDQVDLDALEHAVVPPAIRLGRALDLPAPATETQTL
AELRGLAAKNRSMVQMIGMGYHDTITPGVIKRNVLENPAWYTAYTPYQPEISQGRLEALL
NFQTAVSDLTGLDIANASMLDEATAAAEAMTLMRRTSRSKSNRFVVDADTLPQTIAVIMT
RAEPLDIEVLVTDLYSADAGLPIGDFFGLLLSYPGASGAVRDQQALIADAHSREAKVTVA
ADLMALTLLRPPGEIGADIAVGSTQRLGVPLGFGGPHAGYMAVRTDVQRQLPGRLVGVSH
DAAGNPAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYTVYHGPEGLRRIAQKMHL
QAAQIAATLRGAGVTVEHDVFFDTVRALVPGRAREIVTAAREEGVNLWADGEDAVQISVS
EKTSAAHIESVVGVFGAEAEGWTAVSFFGDLQRTTTFLTHPVFHEHRSETAMLRYLRRLS
DMDLALDRSMIPLGSCTMKLNATTEMEAVTWPEFAGLHPFAPVQDAAGMLELVDQLEKWL
VEITGYAAVSLQPNAGSQGELSGLLAIRAYHRSRGDDHRTVCLIPASAHGTNAASAVMAG
MKVVVVGTDDGGNIDMTDLAAKVALHGENLAAIMITYPSTHGVFEDTITDLAALVHGAGG
QVYVDGANLNALVGLARPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVAAHLAPFLPS
HPLGLIDPSRGEVGTFGSIGAISAAPWGSASILPISWAYIRMMGADGLRRATLTAIASAN
YIARRLDEHFPVLYTSATGFVAHECILDLRPMTAATGVTVDDVAKRLADYGFHAPTMSFP
VAGTLMVEPTESEDLAEINRFCDAMIAIKGEVDQVAAGVWPVTDNPLRGAPHTAESLVGD
WDHPYTRTQAVFPAGVVPARKYFPPVARIDGAFGDRNLVCSCPPVEAYA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ctggaccccgagaacttcgccgaccgtcacatcggcgtcgacgtcccgggcctggccgcc
atgctcgaggccctcgaccaggtcgacctggacgcactggagcatgccgtggtcccgccg
gcgatcaggttgggccgcgcgctcgacctcccggcaccggccaccgagacgcagacgctg
gccgaactacgcgggctcgcggcgaagaaccggtcgatggtccagatgatcggcatgggc
taccacgacaccatcacccccggtgtgatcaagcggaacgtgctggagaacccggcctgg
tacacggcctacacgccctaccagccggagatctcgcagggccgcctcgaggccctgctg
aacttccagacggcggtctcggacctgacgggactagacatcgccaacgcctccatgctg
gacgaggccaccgcggcggccgaggcgatgacgctgatgcgccggacctcccggtcgaag
tcgaaccgcttcgtggtggacgcggacaccttgccgcagaccatcgcggtgatcatgacg
cgggccgagcccctggacatcgaggtgctggtcaccgatctctactcggccgacgccggc
ctgccgatcggcgacttcttcgggctgctgctgtcctaccccggtgcctccggtgccgtc
cgggaccagcaggcgctgatcgccgacgcgcacagccgtgaagccaaggtcaccgtcgcc
gccgacctgatggcgctgaccctgctgcggccgccgggggagatcggcgccgacatcgcc
gtgggctcgacccagcgtctcggtgttccgctgggtttcggcggcccgcacgccggctac
atggcggtccgcaccgacgtccagcggcagctgcccgggcgtctggtcggcgtgtcccac
gacgccgccggcaatccggcctaccgcctggccctgcagacccgcgagcagcacatccgg
cgggagaaggccacgtccaacatctgcaccgcgcaggtgctgctggccgtcatcgcctcg
atgtacacggtctaccacgggccggagggcctgcgccggatcgcgcagaagatgcacctg
caggccgcacagatcgccgcgaccctgcggggcgccggcgtcaccgtggagcacgacgtc
ttcttcgacaccgtccgcgccctggtgcccgggcgggcgcgcgagatcgtcacggccgcc
agggaggagggcgtcaacctctgggccgacggtgaggacgccgtccagatctccgtgtcg
gagaagaccagcgccgcccacatcgagtcggtggtgggcgtcttcggcgccgaggcggag
ggttggacggccgtcagcttcttcggcgacctgcagcggacgaccaccttcctgacgcac
ccggtgttccacgagcaccgctccgagaccgcgatgctccgttacctgcgccggctctcg
gacatggacctggcgctggaccgcagcatgatcccgctgggctcgtgcacgatgaagctg
aacgccaccaccgagatggaggcggtgacctggcccgagttcgccggcctgcatccgttc
gccccggtccaggacgccgccgggatgctcgaactggtcgaccagctggagaagtggttg
gtcgagatcaccggctacgccgccgtttcgctgcagcccaacgccggctcccagggcgag
ctgtccggcctgctggcgattcgcgcctaccacaggtcgcggggcgacgaccaccgcacg
gtctgcctgatcccggcgtctgcgcacggcaccaacgccgcctcggccgtgatggccggg
atgaaggtcgtcgtcgtcggcaccgatgacggcggcaacatcgacatgacggacctcgca
gccaaggtcgcgctgcacggggagaacctggccgcaatcatgatcacctacccgtccacc
cacggtgtcttcgaggacaccatcaccgatctggccgctctggtgcacggggcgggcggg
caggtctacgtcgacggggcgaacctgaacgcgctggtcggactggcccgtccgggggag
ttcggcggggatgtctcccacctgaacctgcacaagacgttctgcatcccgcacggcggt
ggcggccccggcgtcgggccggtggcggttgccgcgcacctcgcgccgttcctgccgagc
cacccgctcggcctgatcgatccgtcgcggggcgaggtcgggacgttcggctccatcggt
gccatctcggcggccccctggggttcggcctctatcctgccgatctcctgggcctacatc
cggatgatgggcgcggacggactgcgtcgggccacgttgacggcgatcgcatcggcgaac
tacatcgcccgtcgtctggacgagcacttcccggtgctctacaccagcgcgaccgggttc
gtcgcgcacgagtgcatcctggacctccgcccgatgacggcggccaccggagtgaccgtc
gacgacgtggcgaagcgcttggcggactatgggttccacgctcccacgatgtcgttcccg
gtcgccgggacgctgatggtggagccgaccgagagcgaggacctggccgagatcaaccgc
ttctgcgatgcgatgatcgccatcaagggcgaggtcgaccaggtggccgccggggtctgg
ccggtgaccgacaacccgctgcgcggcgctccacacaccgcggagtcgctcgtcggcgac
tgggaccacccgtacacccgcacccaggcagtcttcccggccggggtggtgccggcccgc
aagtacttcccgccggtggcccggatcgatggcgccttcggcgaccggaacctggtctgt
tcctgccctccggtggaggcgtacgcgtag
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