KEGG   Nakamurella sp. PAMC28650: H7F38_12625
Entry
H7F38_12625       CDS       T08954                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
naka  Nakamurella sp. PAMC28650
Pathway
naka00300  Lysine biosynthesis
naka00470  D-Amino acid metabolism
naka01100  Metabolic pathways
naka01110  Biosynthesis of secondary metabolites
naka01120  Microbial metabolism in diverse environments
naka01230  Biosynthesis of amino acids
Module
naka_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:naka00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    H7F38_12625
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    H7F38_12625
Enzymes [BR:naka01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     H7F38_12625
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: QNK83387
LinkDB
Position
2775955..2776773
AA seq 272 aa
MPAVPFVKGHGTENDFVLLPDRDGLLEITDSQVRALCDRRAGLGADGVIVVRGSTVPGTD
FFMDYRNADGSFAQMCGNGARLFARFLVDAGWQDPGSFAFLTRGGIRTAAVGPVGDVIIG
MGPATVGAGSKAELAGVAFSGTAVDVGNPHLVTMLDSAADLDDLDLTDAPVVDPAMFPDG
VNVEFVVPVAADHLRMRVFERGVGETRSCGTGTVAAAAAFRALSGGSRQRVRVDVPGGSV
IVTLDADGTSLTGPAVLVAQGTVDQDFWDANR
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcccgctgtcccgttcgtcaaaggccacggcaccgagaacgacttcgtcctgctgccc
gatcgggacggcctcctggagatcaccgattcgcaggtcagggcgctgtgcgaccggcgg
gccggactcggcgccgatggcgtgatcgtcgtcagaggctcgaccgttcccggcacggac
ttcttcatggactaccgcaacgccgacggttcgttcgcccagatgtgcggaaacggagct
cggctcttcgcccggttcctggtcgacgccggctggcaggacccgggaagtttcgccttc
ctgaccaggggcgggatccgcaccgccgcggtgggtccggtcggtgacgtgatcatcggg
atgggtccggccacggtcggggcgggatcgaaggccgaactggccggtgtcgctttctcc
ggcaccgcggtcgacgtgggcaacccgcacctggtgacgatgctcgactccgccgcggac
ctcgacgacctggacctgacggatgctccggtggtcgatcccgcgatgttcccggacggg
gtcaacgtcgaattcgtggtgccggtcgcggcagatcacctccggatgcgcgtgttcgag
cgcggtgtcggcgagacgcgttcctgcggaaccggaacggtcgctgctgcggccgccttc
cgcgccctctccggtggttcccgacagcgggtcagggtcgatgtgccgggcgggtcggtg
atcgtgaccctcgacgccgacgggacctcgctgaccgggccggcggtgctggtggcgcag
ggcaccgtcgaccaggacttctgggacgcgaaccgctag

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