Nakamurella sp. PAMC28650: H7F38_14835
Help
Entry
H7F38_14835 CDS
T08954
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7F38_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naka03019
]
H7F38_14835
03009 Ribosome biogenesis [BR:
naka03009
]
H7F38_14835
Enzymes [BR:
naka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H7F38_14835
Messenger RNA biogenesis [BR:
naka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7F38_14835
Ribosome biogenesis [BR:
naka03009
]
Prokaryotic type
rRNA helicases
H7F38_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
HEM4
AAA_22
DUF6892
Motif
Other DBs
NCBI-ProteinID:
QNK79555
UniProt:
A0A7G8WGR2
LinkDB
All DBs
Position
complement(3275373..3277373)
Genome browser
AA seq
666 aa
AA seq
DB search
MAPLAAPAQTTESILELDSELNEGFELEIDDVDTTDADDLSTDALLTQDSTEEADFDDVL
VEEAAFGFEDLNLPAALLKGVKALGFTVPSEIQEQAIPALLSGRDITGVAQTGTGKTAAF
GLPLLASIDPSLRQVQALVLTPTRELAMQVAEAIGSFAEFMPKLTVVPVYGGSSFLPQKM
ALKNGAQVVVGTPGRIIDHLERGTLDLTGIRFLVLDEADEMLRMGFAEDVDRILQDAPKD
RQTALFSATMPSAIRNVANRHMNKPIDITVAKKAGNTVSIRQTYAVVPFREKVDALARIL
QVSAGDATIVFVRTKGACDEVGAELIARGVSAAAINGDVPQKERERIIERLRSGKLDVLV
ATDVAARGLDVDRIDLVVNFDAPGEVESYTHRIGRTGRAGRSGEALTFFTPREMSRLRLI
ERYTKTTLEQITPPTRADVAAHKAAKVLEDATNRLAVGRLEHYRQAVATYLSQQDLTAAE
LAATLLALAAGDDGVVAPKQSTASFASERPERGGEYASRRGDDRFSRGSRDGGRDDFTNS
RAETNRPDRPRKRDAVPAGPRYRVAVGHAHGVRPAGIVGAITAEGGLTGRDLGRIDIFDT
YSLVEIGGHISPAAFGRISAAKVSGQSLKIQLDTTTPHTAGGASSGPRRSGPGHERPART
GSRAGH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccttgctgcccctgcccagactactgaatcgattctggagctcgactccgag
ctcaacgaaggtttcgagctggagatcgacgacgtcgacaccaccgatgcggacgatctc
tccaccgacgctctcctcacccaggacagcaccgaagaagccgacttcgacgacgttctc
gtcgaagaggctgctttcggcttcgaagatctcaatctccccgctgcgctgctgaagggc
gtcaaggctctcggcttcacggtgccctccgagatccaggagcaggccatcccggcgctg
ctgtccggccgtgacatcaccggtgtcgcacagacgggcaccggcaagacggccgccttc
ggcctcccgctgctggcgtccatcgatccctcgctccgtcaggtccaggccctggtcctg
acgccgacccgcgagctcgccatgcaggtggccgaggccatcggctcgttcgccgaattc
atgcccaagctgaccgtggtgcccgtctacggtggatccagtttcctcccgcagaagatg
gcgctgaagaacggtgcccaggtcgtcgtcggcacccccggccggatcatcgatcacctc
gagcgcgggacgctcgacctgaccggcatccgcttcctcgtcctggacgaggccgacgag
atgctgcggatgggcttcgccgaagacgtggaccgcattctgcaggacgcgccgaaggac
cgtcagacggccctgttctcggccaccatgccgtcggcgatccgtaacgtcgcgaaccgg
cacatgaacaagccgatcgacatcaccgtcgccaagaaggccggcaacacggtcagcatc
cgccagacctacgccgtcgtcccgttccgcgagaaggtcgacgcgttggcacgcatcctc
caggtcagcgccggcgacgccaccatcgtgttcgtccgcaccaagggcgcctgtgacgag
gtcggtgccgaactgatcgcgcgcggcgtctccgccgccgccatcaacggcgacgtcccg
cagaaggagcgcgagcgcatcatcgagcgcctccgctccggcaagctcgacgtcctggtc
gccaccgacgtcgccgcccgcgggctcgacgtcgaccggatcgacctggtcgtcaacttc
gatgctccgggcgaggtcgagtcgtacacgcaccgcatcggccggaccgggcgcgcggga
cgcagtggtgaagccctgaccttcttcacgcctcgcgagatgagccgcctccggctgatc
gagcgctacaccaagaccaccctcgagcagatcaccccgccgacccgggcggacgtcgct
gcgcacaaggcggccaaggtgctcgaagatgcgacgaatcgtctggccgtcggtcggctg
gaacactaccgccaggccgtcgccacgtatctgtcgcagcaggacctgacggccgccgag
ctggccgccaccctgctggcgctggccgccggtgacgacggtgtggtcgcgccgaagcag
tcgaccgcctccttcgcctcggagcgaccggagcgcggcggcgagtacgcctcacggcgt
ggcgacgatcgcttctcccgtggcagccgcgacggcggtcgtgacgacttcaccaactcg
cgcgccgagaccaaccgcccggatcgtccgcgcaagcgcgacgccgtcccggccggcccc
cgctaccgagtcgcggtgggtcacgcccacggcgtccgtccggccggtatcgtcggtgcg
atcaccgcggaaggcggcctgaccggccgcgacctcggccggatcgacatcttcgacacc
tactcgctggtcgagatcggcggccacatctcccccgccgccttcggtcgcatctccgcg
gccaaggtgagcgggcagtcgctcaagatccagctggacactacgacgccgcacaccgcg
gggggcgccagctcgggtccgcgccgctccggccccggccacgaacgcccggcccgtacc
ggatcccgcgccggacactga
DBGET
integrated database retrieval system
