Nakamurella sp. PAMC28650: H7F38_15335
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Entry
H7F38_15335 CDS
T08954
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
naka
Nakamurella sp. PAMC28650
Pathway
naka03030
DNA replication
naka03430
Mismatch repair
naka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H7F38_15335 (dnaE)
03430 Mismatch repair
H7F38_15335 (dnaE)
03440 Homologous recombination
H7F38_15335 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naka03032
]
H7F38_15335 (dnaE)
03400 DNA repair and recombination proteins [BR:
naka03400
]
H7F38_15335 (dnaE)
Enzymes [BR:
naka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H7F38_15335 (dnaE)
DNA replication proteins [BR:
naka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H7F38_15335 (dnaE)
DNA repair and recombination proteins [BR:
naka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H7F38_15335 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QNK83799
UniProt:
A0A7G8WTV6
LinkDB
All DBs
Position
3377380..3380967
Genome browser
AA seq
1195 aa
AA seq
DB search
MAGQIRAASAPRIVEGGRQLSGISGDSFVHLHVHTEYSMLDGAARLGHLFERAGEMEMPA
LAMTDHGNVFGAHDFYKQARAAGINPIIGLEAYVTPNTSRFHKKGVRWSEGGDDDVSGSG
AYTHMTLLSETTEGMHNLFRLSSRSSLEGFYYKPRADRELLNQYAKGLIATTGCPSGEVQ
TWLRIGKYGNALASAAEFRDIFGRENYFVELMDHGLSIETRVHSGLMRIAKDLELPMIAT
NDLHYVDPADADSHEALLCVQSGKTMDDPNRFKFDARDFYLKSPREMRELWEGKFDLKEA
CDNTLLIAERCKVEFDEDSSYMPRFHVPDGETEQSWFVKEVQIGMNARFPNGIPPECQTQ
AEFEIGVITGMNFPGYFLVVADFINWAKTNGIRVGPGRGSGAGSMVAYAMRITDLNPLQH
GLIFERFLNPERVSMPDFDVDFDERRRGDVIRYVTEKYGDDRVAQIVTYGTIKAKQAVKD
SARVLGMPFSVGDRITKVMPAPVMGKDVPLSKIFEPSDARYSEGAEFRALVESDVDVRRV
VDMAKGLEGLKRQWGVHAAGVIMSSEPLQNLIPIMKREQDGAIITQFDYPTCESLGLIKM
DFLGLRNLTVLDDALINIKANRGETIVLEDLSLDDPKTFELLARGDTLGVFQLDGGPMRA
LLRSMKPDNFEDISAVGALYRPGPMGANSHNEYADRKNNRKPVVPIHPELAEALSEILGD
TYGLIVYQEQVMAIAQHVAGYSLGAADLLRRAMGKKKKSELDKQFANFSAGMTDRGFSPA
AVQTLWDILLPFSDYAFNKAHSAAYGLVSYWTAYLKANYPSEYMAALLTSVGDDKDKSAV
YLAECRNMGIKVLPPDVNASEKNFAPVGTDIRFGLSAIRNVGAGAVASLIATRKAKGDFA
DFSDFLSKVEAVVCNKKVVESLIKAGAFDSLKHPRKGLLMAHAEGIDLYMNVKKAEAAGQ
FDLFGEMSAEDVGGSLTVTVPDTEWDQKLLLGFEREMLGLYVSGHPLSGIEHVLSAQSDA
SIPDIIDGTVPDRATVTVGGILTGLQRRLTKKGDPWASAQLEDLAGGVEVAFFPKVYAEF
ALSLAEDAVVLVKARVSRSDDRLSLHAQSVVLPDLSGPSSKGPMQVTMSATRCTPPVVDR
LREVLQNHPGTTAVHLRLMNGARATTLRLDDGLRVTWTSALMGDLKALLGADCLA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggccggacagattcgagcagcatccgcaccgagaatcgtcgaaggaggccgtcagttg
tccgggatttcaggcgattccttcgtccatctgcacgtacacaccgagtactcgatgctg
gacggcgcggcccggctggggcacctgttcgaacgggccggcgagatggagatgccggcc
ctcgcgatgaccgaccacggcaacgtcttcggcgcacacgatttctacaagcaggcgcgg
gcggccggcatcaacccgatcatcggcctcgaggcgtacgtgacgcccaacacgtcccgg
ttccacaagaagggcgtgcgctggtccgagggcggcgacgacgacgtctccggttccggt
gcctacacccacatgaccctgctctcggaaaccaccgagggcatgcacaacctgttccgg
ctgtcgtcgcggagctcgctcgagggcttctactacaagccccgcgccgatcgggagttg
ttgaaccagtacgcgaaagggctgatcgccaccaccggctgcccgtccggtgaggtgcag
acctggctgcggatcggcaagtacgggaacgcgctcgcctcggctgcggaattccgggac
atcttcggcagggagaactacttcgtcgaactgatggatcacgggttgtccatcgagacc
agggtgcattcgggtctgatgcggatcgcgaaggatctggaactcccgatgatcgcgacg
aacgacctgcactacgtcgatccggcggacgccgactcgcacgaggcgctgctgtgcgtg
cagtccgggaagacgatggacgacccgaaccggttcaagttcgacgcgcgggacttctac
ctcaagtccccccgcgagatgcgggagctgtgggagggcaagttcgacctcaaggaggcc
tgcgacaacaccctgctgatcgccgagcgctgcaaggtcgagttcgacgaggactcctcc
tacatgccgcgcttccacgtgccagacggcgagaccgagcagagctggttcgtcaaggag
gtgcagatcgggatgaacgcgcgcttcccgaacggcatcccgcccgagtgccagacgcag
gccgagttcgagatcggcgtcatcaccgggatgaacttccccggatatttcctggtcgtc
gccgatttcatcaactgggccaagacgaacggcattagggtcggtcccggtcgtgggtcc
ggcgccggctcgatggtcgcctacgccatgcggatcaccgacctcaacccgttgcagcac
gggctgatcttcgagcggttcctcaaccccgagcgcgtgtccatgcccgacttcgacgtc
gatttcgacgagcgccgccgcggcgacgtgatccggtacgtcaccgagaagtacggcgac
gaccgggtggcgcagatcgtcacctacggcaccatcaaggccaagcaggcggtcaaggac
tccgcgcgggtgctcggcatgccgttctccgtcggcgaccggatcaccaaggtgatgccc
gctccggtgatgggcaaggacgtgccgctgtccaagatcttcgagccgagcgacgcccgg
tactccgagggggccgagttccgggcgctggtggaatccgacgtcgacgtgcgccgggtg
gtcgacatggcgaagggactggaaggtctcaagcgtcagtggggcgtgcacgcggccggg
gtcatcatgtcgtccgagccgctgcagaacctgatcccgatcatgaagcgggagcaggac
ggcgcgatcatcacgcagttcgactatccgacctgtgaatcgctgggtctgatcaagatg
gacttcctgggcctgcggaacctgacggtcctggacgacgcgctgatcaacatcaaggcc
aaccgcggagagacgatcgtcctggaggatctgtccctggacgatccgaagaccttcgaa
ctgctggcccgcggcgacaccctcggcgtcttccaactggacggcggcccgatgcgggcg
ctgctccggtcgatgaaacctgacaatttcgaggacatctcggcggtcggcgcgctctac
cgaccgggtccgatgggtgccaactcccacaacgagtacgccgaccggaagaacaaccgc
aaaccggtggtccccatccacccggagctggccgaggcgctgtcggagatcctgggcgac
acctacggactgatcgtctaccaggagcaggtgatggcgatcgcgcagcacgtcgccggc
tactccctcggtgcggccgacctgctgcgccgcgcgatgggcaagaagaagaagtcggaa
ctggacaagcagttcgcgaacttctcggccgggatgacggatcgcggtttctcaccggcc
gccgtgcagacgctctgggacatcctgctgccgttctccgactacgccttcaacaaggcg
cactcggccgcctacggtctggtctcgtactggacggcgtacctgaaggcgaactatccg
tccgagtacatggcggcgctgctgacctccgtcggggacgacaaggacaagtcggccgtc
tacctggccgagtgccggaacatgggcatcaaggtcctgccgccggacgtcaacgcgtcg
gagaagaacttcgccccggtcggcacggacatccgcttcgggctgtccgcgatccgcaac
gtcggcgccggagccgtcgcgtcgctgatcgccacccgcaaggccaagggcgacttcgcc
gacttctccgacttcctgtccaaggtggaagccgtggtgtgcaacaagaaggtcgtcgag
tcgctgatcaaggccggtgccttcgactcgctcaagcacccgcgcaaggggctgctgatg
gcccatgcggagggcatcgacctctacatgaacgtgaagaaggcggaggccgccgggcag
ttcgacctcttcggcgagatgagcgccgaggacgtcggcgggtcgctcaccgtcaccgtt
ccggacacagagtgggaccagaaactgctgctcggtttcgagcgggagatgttggggctg
tacgtctccggtcatcccctgtccgggatcgagcacgtcctgtcggcccagtcggacgcg
tccatcccggacatcatcgacggcacggtcccggaccgggccaccgtcacggtgggcggc
atcctgaccggtctgcagcggcggctcaccaagaagggcgacccgtgggcctcggcccag
ctggaggatctggccggcggggtcgaggtcgccttcttccccaaggtgtacgccgagttc
gccctgagcctggccgaggacgccgtggtgctggtcaaggccagggtgtcccggtccgac
gaccggctcagcctgcacgcccagagcgtggtgctgccggacctgtccggcccgtccagc
aagggcccgatgcaggtcaccatgagcgccaccagatgcaccccacccgtcgtcgaccgg
cttcgcgaggtgctgcagaaccatcccggcaccaccgcggtccacctgcgcctgatgaac
ggggccagagccaccacgctgcgcctggacgacggtctgcgggtgacctggacgtccgcg
ctgatgggtgacctcaaggccctcctgggtgcggattgcctggcatga
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