Nakamurella sp. PAMC28650: H7F38_16300
Help
Entry
H7F38_16300 CDS
T08954
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
naka
Nakamurella sp. PAMC28650
Brite
KEGG Orthology (KO) [BR:
naka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
naka03051
]
H7F38_16300 (pafA)
Enzymes [BR:
naka01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
H7F38_16300 (pafA)
Proteasome [BR:
naka03051
]
Prokaryotic proteasome
Bacterial regulatory particles
H7F38_16300 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QNK79804
LinkDB
All DBs
Position
3606114..3607472
Genome browser
AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGITCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGSRLYLDVGS
HPEYATAECDDLLTLIAHDKAGERILQDLVVDAEARLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLIARAGEFSRIADGLIPFLVTRQLIAGAGKVLQSPRGASYCLSQRADHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSQTTTLLKVGSAALVLEMIEAGIQL
RDFTFDNPIRAIREISHDITGRRTVRLANGSEISALDAQTEYYTKAVDYVAGRGTDPISE
RVLDLWGRTLKGVEIGDLSGVDTEIDWVIKKKLIDSYAARHGMDLADPRIAQIDLTYHDV
RPGRGLHSLLVKKGMAATVVTDDEITDATTLAPQTTRAKLRGEFVAAAQDAGRDYTVDWV
HLKLNDQAQRTVLLKDPFRNTDDRVTKLIESL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatcatgggcatcgaaaccgagttcggcatcacctgtaccttccacgga
cagcgccgcctctcacccgacgaggtcgcgaggtacctgttccgccgggtggtgtcgtgg
ggccggtcgtcgaacgtcttcctgcgcaacgggtcgaggctctacctcgacgtcggatcc
cacccggagtacgcgaccgccgagtgcgacgacctcctgacgttgatcgcccacgacaag
gccggcgagcggatcctgcaggacctggtcgtggacgcggaggcgcgactggccgaggaa
ggcatcggcggcgacatctacctgttcaagaacaacaccgattcggccggcaactcctac
ggctgccacgagaacttcctgatcgccagggccggtgagttctcccgcatcgcagacggt
ctcatcccgttcctggtgacccggcagctgatcgccggtgccggcaaggtgctccagtcg
ccgcggggcgcctcctactgcctgtcgcagcgggccgaccacatctgggaaggtgtgtcc
tccgcgaccacccgctcccggccgatcatcaacaccagggacgaaccgcacgccgacgcc
gagcggtaccgccgcctgcacgtcatcgtcggggactcgaacatgagccagacgaccacg
ctgctcaaggtcggcagcgccgccctcgtgctggagatgatcgaagcgggaatccagttg
cgggacttcaccttcgacaatccgatccgggcgatccgggagatctcgcacgacatcacc
gggcgccggacggtgcggctggccaacggttcggagatctcggcgctggacgcccagacg
gagtactacaccaaggccgtcgactacgtcgccggccgggggaccgacccgatatccgag
cgggtgctcgatctgtggggccggacgctcaagggggtcgagatcggcgacctgtccggg
gtggacaccgagatcgactgggtgatcaagaagaagctgatcgactcctacgcagcccgg
cacggcatggacctggcggacccgcgcatcgcccagatcgacctgacgtaccacgacgtc
cggcccggtcgcggcctgcactcgctgctggtgaagaagggaatggccgccaccgtcgtc
accgacgacgagatcaccgatgccaccaccctcgcgccgcagacgaccagggccaaactc
aggggcgagttcgtcgccgcagcgcaggacgccggccgcgactacaccgtcgactgggtg
cacctgaagctcaacgaccaggcgcagcgcaccgtcctgctcaaggacccgttccgcaac
actgatgaccgcgtcaccaagctcatcgaatccctgtag
DBGET
integrated database retrieval system
